Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1202 |
Symbol | |
ID | 5162202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 1337539 |
End bp | 1338435 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640553117 |
Product | ROK family protein |
Protein accession | YP_001234333 |
Protein GI | 148260206 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTATC GCATCGGCAT CGACCTGGGC GGGACCAAAA TCGAGATCGC GGCGCTGATG CCCGACGGCT CGCTGGCGCA TCGCGTGCGG GTTCCGACAC CGCAGGATTA CGGTCGGACG ATCGACACGA TCGCCGGCCT CGTTCAGGAT GCCGAGGCCA GGCTCGGCCC GGCGCATGGC ATCGGCATCG GCATTCCAGG GACGATCAGC CCGGCCACCG GCCTCGTGAA GAACGCCAAT TCCGAGCGGC TGAACGGCAA CCCGTTCGAC AAGGACCTCG AGGCGAAGCT CGGCCGGCCC GTCCGCGTCT CGAACGACGC GAACTGTTTC GCGATGAGCG AGGCGGCGGA CGGCGCGGGC GCGGGCGCGC ATTGCGTCTT CGGCGTGATC ATCGGCACCG GCTGCGGCGG CGGCATCGTG ATCGACGGCA AGGTGCTGGA AGGGCGGCAT CACATCGCCG GCGAATGGGG CCATACCCCG CTGCCCTGGC CACGCATGGA GGAAATGCCG TTGCGGCGCT GCTGGTGCGG CAAGCCGGGC TGCCTCGAGA CTTACATCGC CGGCCCGGCG CTGGCCGCAG AGGCGGACGG GCCGGGCGCC CGGGATGCGG GCTCGGTGCC GGCACGCGCC GCCGCCGGCG AGGAACGCGC CATCCGCGCC CTCGCCATCC ATGCGGACCG GCTGGCGCGC GGCCTCGCCA TGATCGTCAA CATCCTCGAT CCGGACGTGA TCGTGCTGGG CGGCGGACTG TCGAATCTCG ACCATCTCTA CACCGACCTG CCGGGGCTGA TGAAACCCTA CATCATCAGC GACACGTTCG ACACGCCGGT GGTCCGCAAC AAGCACGGCG ATTCCTCGGG CGTGCGGGGC GCGGCCTGGC TCTGGCCGGC GCCCTGA
|
Protein sequence | MTYRIGIDLG GTKIEIAALM PDGSLAHRVR VPTPQDYGRT IDTIAGLVQD AEARLGPAHG IGIGIPGTIS PATGLVKNAN SERLNGNPFD KDLEAKLGRP VRVSNDANCF AMSEAADGAG AGAHCVFGVI IGTGCGGGIV IDGKVLEGRH HIAGEWGHTP LPWPRMEEMP LRRCWCGKPG CLETYIAGPA LAAEADGPGA RDAGSVPARA AAGEERAIRA LAIHADRLAR GLAMIVNILD PDVIVLGGGL SNLDHLYTDL PGLMKPYIIS DTFDTPVVRN KHGDSSGVRG AAWLWPAP
|
| |