Gene Acry_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1062 
Symbol 
ID5161439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp1184972 
End bp1185958 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content63% 
IMG OID640552980 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001234197 
Protein GI148260070 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.524884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGA AGACACTGCT CGGCCCGGCC TGCCTCGGCG CCGTGCTTGC CGCATCGGCG 
GCGCTGCCGG CCCATGCCGC GACCCAGCCG GCGATCCATT CGCAGAAGGG CAGCAACGGC 
AAGACGATCG CCATCTTCGT CCCCTCGCTC AGCAATCCGT TCTTCGTGGC GGAGGAAAAA 
TTCGCCGCCG AGGAAGCGAC GAAGCTCGGC TACGGCACGA TGGTCGCGAG CCATAACGGC 
AATGCCTATA CCCAGCTCAA CCTGATCAAA ACCGCGATCG CGCGCCACGT CGCCGCGATC 
ATTCTCGACA ATGCGGGCGC GGATTCGTCG ATCTCGGCGG TGAAGCTCGC GACCAAGGCG 
GGCGTTCCGG TCTTCCTGAT CGACCGCGAG ATCAACGCCA AGGGCATCGC CAAGGCGCAG 
ATCGTCTCCA ACAACTTCCA GGGCGCGCAG CTGGAGGGGA CGGAGTTCGC GAAGCTGATG 
GGCTACAAGG GCACCTATGT CGAGCTGACC GGCCTGCCGT CGGACACCAA CGCCAAGGTC 
CGCTCGCAGG GTGTCGCCAG CGTGCTCAAG CATTTCTCCG GCATGAAGAT GGTCGCCGTG 
CAGACCGCCG ACTGGTCGCA GTCGAAGGGC TTCCAGGTGA CGCAGACGCT GCTCGAGGCG 
CATCCGCACA TCAAGGGCCT GATCGCCGAC AACGACACGA TGGCGATGGG TGCTGAAGCG 
GCGCTGCTCG CGGCCCACAA GCCGAACGTG ATCGTCACCG GCTTCGATGG CAGTCCGGAC 
GTGATCAATT CGATTCGCAA GGGCCAGATC AAGGCCGACG TGCTGCAGCC GATCGCGACC 
TTCTCGCGCG AGGCGGTGAT CGAGGCGGAC AAATACATCC GCACCGGCAA GACCGGCAAG 
CCTGAGAAGC AGGAGCTGAA CTGCACGCTG ATCACCAAGG CGAATGTCGG CGACTACACC 
AACTGGGCGA TGAAATCGAA ATCCTGA
 
Protein sequence
MKLKTLLGPA CLGAVLAASA ALPAHAATQP AIHSQKGSNG KTIAIFVPSL SNPFFVAEEK 
FAAEEATKLG YGTMVASHNG NAYTQLNLIK TAIARHVAAI ILDNAGADSS ISAVKLATKA 
GVPVFLIDRE INAKGIAKAQ IVSNNFQGAQ LEGTEFAKLM GYKGTYVELT GLPSDTNAKV 
RSQGVASVLK HFSGMKMVAV QTADWSQSKG FQVTQTLLEA HPHIKGLIAD NDTMAMGAEA 
ALLAAHKPNV IVTGFDGSPD VINSIRKGQI KADVLQPIAT FSREAVIEAD KYIRTGKTGK 
PEKQELNCTL ITKANVGDYT NWAMKSKS