| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0991 |
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| Symbol | |
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| ID | 5161606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 1096102 |
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| End bp | 1097760 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640552908 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001234127 |
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| Protein GI | 148260000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0436021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGCG AATACGACTA CATCATCGTC GGCGCCGGTT CCGCCGGCTG CGCGATGGCG
AACCGCCTCA CCGAGGATGG CAACGCCACC GTGCTGCTGC TCGAATTCGG CGGCTCCGAC
CGCTCGCCCT TCATCCAGAT GCCGAGCGCG CTGTCGATCC CGATGAACAC CAGGAAGTAC
GACTGGGGCT ATCACAGCGA GCCCGAACCG CATCTCGGCG GGCGGCGGAT GCACACGCCG
CGCGGCAAGG TGCTCGGCGG CTCCTCCTCG ATCAACGGCC TCGTCTACAT CCGCGGCAAC
GCGATGGATT TCGAGCACTG GGAGGAAATG GGCGCGCGCG GCTGGGGCTG GCGCGACGTG
CTGCCCTATT TCCGCCGCGC CGAAACCCGT GCGGAGGGCG GCGACGCCTA TCGCGGCGAT
TCCGGCCCGC TGCACACCAG CTACGGCCGC CTCGCCAACC CGCTCTACCG CGCCTTCATC
GAGGCCGGGC GCCAGGCCGG CTACCCCGTC ACCGACGATG TCAACGGCTA CCAGCAGGAA
GGCTTCGGCC GGATGGACAT GACCGTCCAT CGCGGCCGCC GCTGGAGCAC GGCGAACGCC
TATCTGCGGC CGATCCGCAA CCGCCCCAAC CTCACCCTGC ACGCGCGCAG CCTGGTCTCG
CACATCGTCT TCGCCGGCAA GGCGGCCAGC GGTGTCGCCT ATCGCCGCTT CGGGCAGGAC
ATCGTCGCCC GCGCCCGCCG CGAGGTGATC CTCGCCGCCG GCGCCATCAA CTCGCCGCAA
CTGCTCAAGC GGTCCGGCAT CGGCCCCGCC GCCGAACTCG CCGCGCTCGG CATCGACGTC
GTGGCCGACC GTCCCGGTGT CGGCGAGAAC CTGCAGGACC ACCTCGAATT CTACTTCCAG
GTCGCCTGCA CCCGGCCGAT CACGCTGTAT TCGGCGATGA ACCCGCTCGC CAAGGCGATG
ATCGGCCTGC GCTGGCTGCT GTTCCACGAC GGTCTCGGCG CCACCAACCA TTTCGAGAGC
TGCGGCTTCA TCCGCTCGCG CCCCGGCGTC GAATACCCAG ACATCCAGTA TCACTTCCTC
CCCGTCGCCA TCCGCTACGA TGGCCGCGCC CACGCCACCC AGCACGGCTT CCAGGCCCAT
GTCGGCCCGA TGCGCTCGAA CAGCCGCGGC TGGGTCCGCC TGCGCGACCG CAATCCCGCA
ACCCCGCCGC GGATCTTCTT CAACTACATG AGCGAGAAGC AGGACTGGGC GGACATGCGC
GCCTGCGTGC GCCTCACCCG CGAGATCTTC GCGCAGGAGG CCTTCGCTCC CTTTCGCGGC
GCCGAAATCG CCCCTGGCGC CGATGTCACC ACCGATGCGG AGATCGACGC CTTCATCCGC
GGCGCCGTCG AAAGCGCCTA CCACCCCAGC GGCACCTGCC GCATGGGCGA TGCCGCCGAT
CCGCTCGCGG TGGTCGATCC CGAAACCCGC GTCATCGGCG TCGAGCGCCT GCGCGTCGCC
GATTCCTCGA TCATGCCGCG CATCACCAAC GGCAATCTCA ACGCGCCCAC CATCATGATC
GGCGAGAAGG CGGCCGACCA CATCCGCGGC CGCGACCCGC TGCCGCCGAG CAACGCGCCG
TTCCATCGCG CCGAACGCTG GCAAACCGCC CAGCGCTGA
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| Protein sequence | MPSEYDYIIV GAGSAGCAMA NRLTEDGNAT VLLLEFGGSD RSPFIQMPSA LSIPMNTRKY
DWGYHSEPEP HLGGRRMHTP RGKVLGGSSS INGLVYIRGN AMDFEHWEEM GARGWGWRDV
LPYFRRAETR AEGGDAYRGD SGPLHTSYGR LANPLYRAFI EAGRQAGYPV TDDVNGYQQE
GFGRMDMTVH RGRRWSTANA YLRPIRNRPN LTLHARSLVS HIVFAGKAAS GVAYRRFGQD
IVARARREVI LAAGAINSPQ LLKRSGIGPA AELAALGIDV VADRPGVGEN LQDHLEFYFQ
VACTRPITLY SAMNPLAKAM IGLRWLLFHD GLGATNHFES CGFIRSRPGV EYPDIQYHFL
PVAIRYDGRA HATQHGFQAH VGPMRSNSRG WVRLRDRNPA TPPRIFFNYM SEKQDWADMR
ACVRLTREIF AQEAFAPFRG AEIAPGADVT TDAEIDAFIR GAVESAYHPS GTCRMGDAAD
PLAVVDPETR VIGVERLRVA DSSIMPRITN GNLNAPTIMI GEKAADHIRG RDPLPPSNAP
FHRAERWQTA QR
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