Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0987 |
Symbol | |
ID | 5161763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 1091492 |
End bp | 1092436 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640552904 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001234123 |
Protein GI | 148259996 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.370865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ACACAATCGG CGCAGCGCTG GCGTCAATCA CGATGAGTCT GGGCATAGCC CACGCGGCGG TTCCCGCCTC GTGCAAGACG ATCCGCATGG CCAATATCGG CTGGACCGAC AATGTGGTCC AGAACGCGGT CTTCTCGACG GTCGCCCAGG CGCTCGGCTA CAAGACCGAC ATCAACCTCT ACTCGCTGGA GGTGATGTAT GCCGGTCTCA GCAACGGCAA GATCGACGTC TTCCTCGACA ACTGGACACC GTCGCAGAAC CCGACCACCA CGCCCTACGA GAAGAAGCAC GAGATCGACG TCATCGGCCC CGACCTCAAG CACGCCAAAT ACACGCTCGT GGTGCCGCAC TACCTCTACG AGAAGGGCCT GAAGACCTTC GCCGACATCC ACAAGTTCGC CAAGGAACTG AACTACAAGA TCTACGGCAT CGAGCCGGGC AACGACGGCA ACCTGCATAT CCTCGCCATG ATCAAGGCGA ACAAGTTCGA CCTCGGCAAG TTCCATCTCG TGCAGTCGAG CGAGGCCGGC ATGCTCGCCG AGGTCGCCCG CAAATACCCG AAGAAGAAGG ACATCGTCTT CCTCGGCTGG GAACCCGAGC CGATGAACGT CGAGTTCCAC ATCAACTACC TCACCGGCGG CCGGGACTAT TTCGGTCCTC ACAAAGGCGA GGCGACGCTC TACATCAACA CGCGCCACAA CTACGCCAAG GACTGCCCGA ATGTCGGCGT CCTGCTGCAC CATTTCTACC TGTCGGTCGG CGACGAGAAC AAGATGATGT ACGACGTCCA GGTCAAGCAT CAGGAGGCCC CCGCCGTCGC CGCCGCCTGG CTGAAGGCGC ATCCCGCCTG GGTCAAGAAA ACCCTCGACG GCGTCACCAC GGTCGACGGC AAGCCGGGCG CGGCGGCGGT GCTCGCCAGC CTGAAGTCGG ACTGA
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Protein sequence | MKKYTIGAAL ASITMSLGIA HAAVPASCKT IRMANIGWTD NVVQNAVFST VAQALGYKTD INLYSLEVMY AGLSNGKIDV FLDNWTPSQN PTTTPYEKKH EIDVIGPDLK HAKYTLVVPH YLYEKGLKTF ADIHKFAKEL NYKIYGIEPG NDGNLHILAM IKANKFDLGK FHLVQSSEAG MLAEVARKYP KKKDIVFLGW EPEPMNVEFH INYLTGGRDY FGPHKGEATL YINTRHNYAK DCPNVGVLLH HFYLSVGDEN KMMYDVQVKH QEAPAVAAAW LKAHPAWVKK TLDGVTTVDG KPGAAAVLAS LKSD
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