| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0966 |
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| Symbol | |
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| ID | 5161968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 1069191 |
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| End bp | 1071074 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640552884 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001234103 |
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| Protein GI | 148259976 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.533344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCAGA AACTCCAGGC GGGTTGCGTC GATCCGGCCG AGATCGACCG CCTCCACGAA
ACCTTCATCC ATGCCTCGGC CGATCTCGCG CGGGATCTTC ACGCGGGAGC CGACGATCCG
GCCATCCGCC GGTTCAACCT CGCGGCGGGC ATGGCATTCG ACGTGGCGCG CCGCTCCATC
CGCTGCGCCA ACGAAGCCCT CGAAGACCTG CGGACCATCC ACCGAATCGC CAGGATCGGC
AACTGGCGCG TTCGGCTCGA CGATCATCTC ACCTCCTGGT CGGAGGACAT GCACGAACTC
TTCGGCACCG ATCCGGATCG TTTCGTGCCG CTGTTCGATG TCCTGACCGG ACAGATGGAC
GAGACCGACA GGACGGCGTT CCTCGCGACC TTCCGCACCG TGGCCGAAAC CGGCCAGGCT
GCCGCGGCGG AAATCCGCAT CCGTGGCGCG GAGGAGGGCG CACGGCGCTG GTTCTGGATC
GACATGCGGC CCGAGACCGA CGACACCGGC GCCATCGTCG CCGTGCGCGG CATCTGCCAG
GAAATCACCG ACCGCAAGGT GGCGCTGGAG CGGATCCGCT ACATGTCCTC GCACGATCCG
CTCACCAACC TGATCAACCG TACCCATCTC CTCGAACGGC TCGACCAGAT CCTGGGCGAA
GCCCGCCGCC GCCGCGAAAA CGTCGCCCTG CTCACCTTCG ACATCGACGA TTTCAAGGGC
ATCAACGATC TGTTCGGCCA CGCGGTGGCC GACAGCGTGC TGCGCGAAAT CGCCGGGCGG
ATCGCCCGCC AGGTGCGCGA GTCCGATCTC GTGGCCCGCA TCGGCGGTGA CGAGTTCGTG
GTGGTCCAGG CCGGGTGCGA ACAGCCCGAA CTGGTCGAAA CCCTGGCCCG CCGCCTGCTG
CGCACGATCG CCGATCCCAT CGTCCTCGCC GATGGCCGCG AAATCGGCAT TTCGGCCTCG
GTCGGTATCG CGCTGCACCC TTTCGACGGC ATGACGCCGG GCGCGCTGCT CGCCCATAGC
AGCCAGGCCC TGCACGTCAT CAAGAAAGAA CGCCCGAACA CCCTCGGCTT CTACGACGCG
TCGGTCCAGT CCGAGTGGCA GAAGCGCCGC GCGCTCGAGC AGGATCTGCG CCTCGCCTTG
CAGCATCGCG AATTGTCGCT GGTCTATCAG CCGATGTTCT GCATGCGATC GTCGCTCTGC
AGCGGCTTCG AGGCGCTGCT GCGCTGGAAC AGCCCGACGC ACGGCCCCGT AGCACCCGAT
CTGTTCATCG GCCTCGCCGA ATCCATCGGC CTGATGGAGG AGGTCGGCAC CTGGGTGCTG
CGCGAAGCCT GTGCCGAGGC CGCGCGCTGG GCGGTACCGC TCACCGTCGC GGTCAATGTG
TCGCCGATCC AGATCCAGCA GGGCGATCTC GCCTCGGTGA TCACCGAAAC CCTGAATACG
ACCGGGCTTC CGGCCAACCG GCTGGAAATC GAAGTCACCG AATCGATGCT GATCCGCAAT
TTCGACCGCG CGGTCGACAC GCTGCAGCGC ATCAAGGCGC TCGGCGTCGG CATTTCGATC
GACGATTTCG GCACCGGCTA TTCATCGCTC GCGACGCTGC GGGCCTTTCC GTTCAACAAA
CTCAAGATCG ACCGCAGCTT CGTCCGCGAT CTTGCGGAGG AATCGGAATC GCTCGCCATC
GTCAACGCCG TCCTCGGCCT CGGCCGGGGA CTTCGCCTGC CCGTCGTGGT CGAGGGGGTG
GAGACGGAAC GCCAGGCCGA CATCCTGCGC GACTGCGGGG CCGATGCCAT CCAGGGCTAT
CTTTTCGGCC GGCCGTCGCC GATCTCCGCT TACAGCAACA TCACGGATCC GCGCGTGACC
TCCCGGCGCC GCCTCGCTGT CTAG
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| Protein sequence | MGQKLQAGCV DPAEIDRLHE TFIHASADLA RDLHAGADDP AIRRFNLAAG MAFDVARRSI
RCANEALEDL RTIHRIARIG NWRVRLDDHL TSWSEDMHEL FGTDPDRFVP LFDVLTGQMD
ETDRTAFLAT FRTVAETGQA AAAEIRIRGA EEGARRWFWI DMRPETDDTG AIVAVRGICQ
EITDRKVALE RIRYMSSHDP LTNLINRTHL LERLDQILGE ARRRRENVAL LTFDIDDFKG
INDLFGHAVA DSVLREIAGR IARQVRESDL VARIGGDEFV VVQAGCEQPE LVETLARRLL
RTIADPIVLA DGREIGISAS VGIALHPFDG MTPGALLAHS SQALHVIKKE RPNTLGFYDA
SVQSEWQKRR ALEQDLRLAL QHRELSLVYQ PMFCMRSSLC SGFEALLRWN SPTHGPVAPD
LFIGLAESIG LMEEVGTWVL REACAEAARW AVPLTVAVNV SPIQIQQGDL ASVITETLNT
TGLPANRLEI EVTESMLIRN FDRAVDTLQR IKALGVGISI DDFGTGYSSL ATLRAFPFNK
LKIDRSFVRD LAEESESLAI VNAVLGLGRG LRLPVVVEGV ETERQADILR DCGADAIQGY
LFGRPSPISA YSNITDPRVT SRRRLAV
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