Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0965 |
Symbol | |
ID | 5161967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 1066951 |
End bp | 1068771 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640552883 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_001234102 |
Protein GI | 148259975 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.831801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTCC AGACCAAGCC TGCCAGTGTC ACGACCGGCC CGATCGCCGG CTCGCGCAAG GTGTTTACCT CGCCCGAGGG GCGGCCCGAC ATCGCCGTGC CGTTCCGCGA GGTCGACCTG CACCCCAGCG CGGGGGAAGC GCCGTTCCGG CTCTATGACA CGTCGGGGCC GTTCACCGAC CCGCATTTCA GTCTCGATCT CGACAACGGG CTGCCGCTGG TGCGCGGCGC CTGGATCGAG CGGCGCGGAT TCGATGCCGT GGCCGGCCGG GCGGTGAAGC CGGAGGATAA CGGATTCGCG GCGGCGGACC GGCTGGTGCC CCCCTGCCCC GCCGGGCGGA GCGTGTTCGC CGGCAAGGAT GGTGCGCTGG TGACGCAGTA TGAATACGCG CGGGCCGGGA TCGTCACGGA AGAGATGATC TATGTCGCGC ATCGCGAAAA TCTCGGCCGG GCGAAGGCCG CCGAAGGCGC GGCGGCGCGG CGGGCGGATG GCGAGCGGTT CGGCGCGGCG ATCCCCGAAT TCGTGACGCC GGAATTCGTC CGCAGCGAAA TCGCGGCGGG ACGGGCGATC ATTCCGGCGA ACATCAACCA CCCCGAGCTG GAGCCGGTGA TCATCGGGCG CAATTTCCTC GTCAAGATCA ACGCCAATAT CGGCAACTCG GCGGTCACCT CGGGGGCCGC GGAAGAGGTC GAGAAGCTGG TCTGGGCGAT TCGCTGGGGC GCGGATACGG TGATGGACCT CTCCACCGGG CGGAACATCC ACAACATCCG CTCCTGGATC ATGCGCAACT CGCCGGTGCC GATCGGCACC GTGCCGATCT ACCAGGCGCT TGAGAAGGTC GGCGGTGATC CGGACAAGCT CGACTGGGAG GTGTTCCGCG ACACGCTGAT CGAGCAGGCC GAGCAGGGCG TGGACTATTT CACCATCCAT GCCGGGGTGC GGCTCGCCCA TGTGCCGCTG ACGGCGAAGC GGGTGACCGG CATCGTCTCG CGCGGCGGGT CGATCATGGC GCGCTGGTGC CTCGCGCATC ACCGCGAGAG CTTCCTCTAC GAGAAGTTCG ACGAGATCTG CGACATCATG CGCAAGTATG ACGTGTCGTT CTCGCTGGGC GACGGGCTGC GGCCCGGCTC GATCGCCGAT GCCAATGACG CGGCGCAGTT CGCCGAGCTG GAGACGCTGG GCGAGCTGAC GAAGATCGCC TGGGCCAAGG GCTGCCAGGT GATGATCGAG GGCCCCGGCC ATGTGCCGAT GCACAAGATC AAGGAGAACA TGGAAAAGCA GCTCGAGGTC TGCCACGAGG CGCCGTTCTA TACGCTCGGG CCGCTGACCA CCGACATCGC GCCGGGCTAC GATCACATCA CCTCGGCGAT CGGGGCGGCG ATGATCGGCT GGTTCGGCAC CGCGATGCTC TGCTACGTCA CGCCGAAGGA GCATCTCGGC CTGCCCAACC GCGACGATGT GAAGACCGGC GTCATCACCT ACCGTCTTGC GGCGCACGCG GCGGATCTCG CCAAGGGGCA TCCGGCGGCG AAGCTGCGCG ACGACGCGGT GAGCCGGGCG CGCTTCGAGT TCCGCTGGGA GGACCAGTTC AATCTCGGCC TCGACCCGGA CACGGCGCGC GCCTTCCACG ACGAGACGAT GCCCAAGGAG GCGCACAAGG TCGCGCATTT CTGCTCGATG TGCGGGCCGA AATTCTGCTC GATGAAGATC ACCCAGGACA TTCGCGACGA GGTGGCGCGC GAGGAAGGGC TCGCGCAGAA GGCGGCGGAG TTCCGCGATG GCGGCAGCCG CATCTATGTC GAGGATCAGG CGGCGGAGTG A
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Protein sequence | MNVQTKPASV TTGPIAGSRK VFTSPEGRPD IAVPFREVDL HPSAGEAPFR LYDTSGPFTD PHFSLDLDNG LPLVRGAWIE RRGFDAVAGR AVKPEDNGFA AADRLVPPCP AGRSVFAGKD GALVTQYEYA RAGIVTEEMI YVAHRENLGR AKAAEGAAAR RADGERFGAA IPEFVTPEFV RSEIAAGRAI IPANINHPEL EPVIIGRNFL VKINANIGNS AVTSGAAEEV EKLVWAIRWG ADTVMDLSTG RNIHNIRSWI MRNSPVPIGT VPIYQALEKV GGDPDKLDWE VFRDTLIEQA EQGVDYFTIH AGVRLAHVPL TAKRVTGIVS RGGSIMARWC LAHHRESFLY EKFDEICDIM RKYDVSFSLG DGLRPGSIAD ANDAAQFAEL ETLGELTKIA WAKGCQVMIE GPGHVPMHKI KENMEKQLEV CHEAPFYTLG PLTTDIAPGY DHITSAIGAA MIGWFGTAML CYVTPKEHLG LPNRDDVKTG VITYRLAAHA ADLAKGHPAA KLRDDAVSRA RFEFRWEDQF NLGLDPDTAR AFHDETMPKE AHKVAHFCSM CGPKFCSMKI TQDIRDEVAR EEGLAQKAAE FRDGGSRIYV EDQAAE
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