Gene Acry_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0888 
Symbol 
ID5162419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp979155 
End bp980207 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content75% 
IMG OID640552804 
Productfimbrial assembly family protein 
Protein accessionYP_001234026 
Protein GI148259899 
COG category 
COG ID 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000454237 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACGAA ACCTTAATTT TCAATTTTTC TTGAGTCGCG TAACCAGAAC ATCAATGGAT 
TTCCTTCATT GGTATATCGC AAGCCTGCGG TCGCTGGTGC CTGGCGCGCT GCGGCGTCCG
GCCGGGCAGG ATGCGGCGAT GACCGTCACC GCCGCCGCCG GCGCGCCCCC GGAAGCCGCC
GAGATCACGC AGGAAGGGCG CGGCGGCGCC CGCGCGCTCG GCCGGCTGGG GCAGATGCGG
CGGAGCGCGG TCATCCGGCC GGTGGTGTTG CGGCTGCGCG GCGCCGGCGC GCTGATCCGC
CGCGTCACCC TCCCCGCCGC CGCGCGGCGC GACCTCGCGG CCGCACTCGC CTTCGAGATC
GACCGCCTGA CCCCCTTCAC CGCCGACGAG GTGCTGGTCA CCCACGAGAT CCTCGCGCGC
GACAACGCGC AGGGCCTGCT CCATGTCCGG CTCGCCGTGC TGCCCCGTGC CTGGATCGCC
GGCCTCCTCG CCGCACTGGG CGAGGCCGGG CTCGCCGCCG TGCGGATCGA GGCCGCCAGC
GCCGAGGACG AGGCCGTCTT CGCGCTGCCT GGCGCCCGGC GGCAAAGCCG CGTCCCCCCG
GCGCTCGCCC TGCTCGCCGC CGGCCTCGCC GCGCTGTGCC TCGCCATTCC GCCGGCGCGC
CAGGCGCTCG CCCTGCACCG GCTCGATGCC GCGCGCGCCG CGCTCGCCCC GCGGCTCCGC
CTTGCCGAGG CTCTGCGCGC CCGCCTCGCC GCCGAAGACC GCTTCCGCGC CGCGCTCGGC
GCCGAGGCAG CGCGCGAGGG CGACACGCTG CTGATGCTCG CCGCCCTCAC CCGCGCCCTG
CCGGACCGCA GCTACCTTAC CGATCTCTCC CTGCGCGACC GGGTGGCGAC GCTCGACGGC
GAATCCCCCA ACGCCGCCGG CCTCGTCGCC CGGCTCGCCG CCGATCCGCA TTTCGCCGAT
CCGGCCTTCG CCGCCCCGGT CACGCGGTCG CTCAACGGCG GCGGCGATGT GTTCTCGATC
CGGGTGCGGC TGCGCGACGA TGAAGCGGGC TGA
 
Protein sequence
MTRNLNFQFF LSRVTRTSMD FLHWYIASLR SLVPGALRRP AGQDAAMTVT AAAGAPPEAA 
EITQEGRGGA RALGRLGQMR RSAVIRPVVL RLRGAGALIR RVTLPAAARR DLAAALAFEI
DRLTPFTADE VLVTHEILAR DNAQGLLHVR LAVLPRAWIA GLLAALGEAG LAAVRIEAAS
AEDEAVFALP GARRQSRVPP ALALLAAGLA ALCLAIPPAR QALALHRLDA ARAALAPRLR
LAEALRARLA AEDRFRAALG AEAAREGDTL LMLAALTRAL PDRSYLTDLS LRDRVATLDG
ESPNAAGLVA RLAADPHFAD PAFAAPVTRS LNGGGDVFSI RVRLRDDEAG