Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0888 |
Symbol | |
ID | 5162419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 979155 |
End bp | 980207 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640552804 |
Product | fimbrial assembly family protein |
Protein accession | YP_001234026 |
Protein GI | 148259899 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000454237 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACACGAA ACCTTAATTT TCAATTTTTC TTGAGTCGCG TAACCAGAAC ATCAATGGAT TTCCTTCATT GGTATATCGC AAGCCTGCGG TCGCTGGTGC CTGGCGCGCT GCGGCGTCCG GCCGGGCAGG ATGCGGCGAT GACCGTCACC GCCGCCGCCG GCGCGCCCCC GGAAGCCGCC GAGATCACGC AGGAAGGGCG CGGCGGCGCC CGCGCGCTCG GCCGGCTGGG GCAGATGCGG CGGAGCGCGG TCATCCGGCC GGTGGTGTTG CGGCTGCGCG GCGCCGGCGC GCTGATCCGC CGCGTCACCC TCCCCGCCGC CGCGCGGCGC GACCTCGCGG CCGCACTCGC CTTCGAGATC GACCGCCTGA CCCCCTTCAC CGCCGACGAG GTGCTGGTCA CCCACGAGAT CCTCGCGCGC GACAACGCGC AGGGCCTGCT CCATGTCCGG CTCGCCGTGC TGCCCCGTGC CTGGATCGCC GGCCTCCTCG CCGCACTGGG CGAGGCCGGG CTCGCCGCCG TGCGGATCGA GGCCGCCAGC GCCGAGGACG AGGCCGTCTT CGCGCTGCCT GGCGCCCGGC GGCAAAGCCG CGTCCCCCCG GCGCTCGCCC TGCTCGCCGC CGGCCTCGCC GCGCTGTGCC TCGCCATTCC GCCGGCGCGC CAGGCGCTCG CCCTGCACCG GCTCGATGCC GCGCGCGCCG CGCTCGCCCC GCGGCTCCGC CTTGCCGAGG CTCTGCGCGC CCGCCTCGCC GCCGAAGACC GCTTCCGCGC CGCGCTCGGC GCCGAGGCAG CGCGCGAGGG CGACACGCTG CTGATGCTCG CCGCCCTCAC CCGCGCCCTG CCGGACCGCA GCTACCTTAC CGATCTCTCC CTGCGCGACC GGGTGGCGAC GCTCGACGGC GAATCCCCCA ACGCCGCCGG CCTCGTCGCC CGGCTCGCCG CCGATCCGCA TTTCGCCGAT CCGGCCTTCG CCGCCCCGGT CACGCGGTCG CTCAACGGCG GCGGCGATGT GTTCTCGATC CGGGTGCGGC TGCGCGACGA TGAAGCGGGC TGA
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Protein sequence | MTRNLNFQFF LSRVTRTSMD FLHWYIASLR SLVPGALRRP AGQDAAMTVT AAAGAPPEAA EITQEGRGGA RALGRLGQMR RSAVIRPVVL RLRGAGALIR RVTLPAAARR DLAAALAFEI DRLTPFTADE VLVTHEILAR DNAQGLLHVR LAVLPRAWIA GLLAALGEAG LAAVRIEAAS AEDEAVFALP GARRQSRVPP ALALLAAGLA ALCLAIPPAR QALALHRLDA ARAALAPRLR LAEALRARLA AEDRFRAALG AEAAREGDTL LMLAALTRAL PDRSYLTDLS LRDRVATLDG ESPNAAGLVA RLAADPHFAD PAFAAPVTRS LNGGGDVFSI RVRLRDDEAG
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