Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0870 |
Symbol | gatB |
ID | 5159617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 962007 |
End bp | 963470 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640552786 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_001234008 |
Protein GI | 148259881 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.579876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTACG TGATCGAGGG GACGACCGGC GCGTGGGAGC TGGTGATCGG GCTTGAGGTC CATGCCCAGG TGATCTCGCG CTCGAAGCTG TTCAGCGGGG CGGCGACGGC CTTCGGCGCC GAACCGAACA GCCAGGTGAG CTTCGTCGAC GCCGGGTTTC CGGGGATGCT GCCGGTGATC AACCGCGAAT GCGTGGCGCA GGCGGTGCGC ACCGGGCTGG GGCTTGCCGC GCATATCAAC CTCGTCTCGC GGTTCGACCG GAAGAACTAT TTCTACGCCG ACCTGCCGCA GGGCTATCAG ATCAGCCAGT ACGAGCATCC GATCGTCGGC GCCGGGGCGA TCGAGATCGA GCTGGAATCG GGCGAGACGC GGACGATCGG GATCACGCGG CTGCATCTGG AGCAGGATGC CGGCAAGTCG ATGCATGACC AGCATCCGAG CAAGTCGCTG ATCGACCTCA ACCGCTCGGG TGTCGCGCTG ATGGAGATCG TCAGCGAGCC GGACATGCGC TCGCCGGAAG AGGCCGGCGC CTATCTGCGC AAGCTGCGCA CCATCCTGCG CTATCTCGGC ACCTGCGATG GCAACATGGA CGAGGGCTCG ATGCGGGCGG ACGTCAACGT GTCGGTGCGC AAGCATGGCG AGCCGTTCCG CACCCGCTGC GAGATCAAGA ACGTCAACTC GATCCGCTTC GTGATGCAGG CGATCGAGGC GGAGGCGAAG CGGCAGATCG AGATCTGGGA AGCGGGCGGG ACGGTGGATC AGGAGACGCG GCTGTTCGAG CCGGCGCGCG GCGTGACCCG CTCGATGCGG AGCAAGGAGG ACGCGCACGA CTACCGCTAT TTCCCCGAGC CGGACCTGCT GCCGCTGGTG CTGGAGGAGG AGTGGGTGGA GTCGCTGAAG GCGACGCTGC CGGAGCTGCC AGATGCGAAG CGGGCGCGGC TGATGCGCGA CTTTGGCCTG TCGCGCTACG AGGCGTCGAT CTTCGTGATG GAGCAGGTGA CGGCGGATTT CTTCGAGACC GTCGCCGCCG GGCGCGATGC GAAGCTGGTG GCGAACTGGA TGCTCGGCGA TTTCTTCGCC CATCTCAACC GCACCGGGAC GAGCATCGAG ACCTCGCCGG TGACCGCGGC CCGGCTCGGC GAGCTGCTCG ACCTGATCAC CGACAAGACG ATCAACGGCA AGATCGCCAA GGAGGTGCTG GAGCTGATGT TCGACACCGG CGATGCGGCG GGCGCGATCG TCGAGGCGCG CGGGCTGAAG CAGGTGACGG ATACCGGCGC GATCGACGAG GCGATCGACC GGGTGGTTGC CGCCAACGCC GACAAGCTCG CCGAATACAA GGCGGGGAAG GACAAGCTGT TCGGCTTCTT CGTCGGCCAG GTGATGAAGG CGATGCAGGG CAAGGGCAAC CCGGCGCTGG TGAACGAGGC GCTGAAGCGG AAGATCGGCG AGCCGGGCGC ATGA
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Protein sequence | MSYVIEGTTG AWELVIGLEV HAQVISRSKL FSGAATAFGA EPNSQVSFVD AGFPGMLPVI NRECVAQAVR TGLGLAAHIN LVSRFDRKNY FYADLPQGYQ ISQYEHPIVG AGAIEIELES GETRTIGITR LHLEQDAGKS MHDQHPSKSL IDLNRSGVAL MEIVSEPDMR SPEEAGAYLR KLRTILRYLG TCDGNMDEGS MRADVNVSVR KHGEPFRTRC EIKNVNSIRF VMQAIEAEAK RQIEIWEAGG TVDQETRLFE PARGVTRSMR SKEDAHDYRY FPEPDLLPLV LEEEWVESLK ATLPELPDAK RARLMRDFGL SRYEASIFVM EQVTADFFET VAAGRDAKLV ANWMLGDFFA HLNRTGTSIE TSPVTAARLG ELLDLITDKT INGKIAKEVL ELMFDTGDAA GAIVEARGLK QVTDTGAIDE AIDRVVAANA DKLAEYKAGK DKLFGFFVGQ VMKAMQGKGN PALVNEALKR KIGEPGA
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