Gene Acry_0864 details

Gene Information

• Locus tag: Acry_0864
• ID: 5162287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 955392
• End bp: 956066
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 640552780
• Product: pseudouridine synthase
• Protein accession: YP_001234002
• Protein GI: 148259875
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0564] Pseudouridylate synthases, 23S RNA-specific

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0335511
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGACC CGGTCATCCT GTACCACTCG ACCCATCTCG TGGTGATCGA CAAGCCGGCC 
GGCCTGCCCA GCCATCGCGG CCGCGGCGGC GGGCCGAGCG TGGAGGACTG GTTTCCCCGC 
TGGCGGCGCG GCGCCGACGG TCCCTGGCTG GTCCACCGGC TCGATGCCGA TACCGCCGGC 
TGCCTCGCCA TCGCCCGGCG CAAGACCACG CTGGTCGCCC TGCAGCGCGC CTTCGCGCAG 
CGCCGGGTCG GCAAGACCTA CTGGGCGATC GTCGAGGGCG TGCCGGCGGC GGCGCACGGC 
ACGATCGAGC TGGCGCTGGC CCGCCGCACC GTTCCCGGCG GCTGGCGCGT CGCGCCCGAT 
CCGCGCGGCG ATCCCGCCAT CACCGACTGG CGGTGCCTCG CGGCGGGGCA GGGCAGGGCG 
CTGCTCGAGC TGCGCCCGCG CACCGGCCGC ACCCACCAGC TGCGCGTCCA TTGCGCCGAA 
TCCGGCTTCC CCATTGTTGG CGACCCGCTC TACGGCACCG AAGCCGGCGG CATGTGCCTG 
CTCGCCCGCG CGCTCGCCCT GCCGCTCGCC CCGCCGGTCG CCGTCACCGC CGCCCTGCCG 
GCGCATTTCC GGGCGGCGGC GGCGGCCTCA GCGCTCGACC TGGCGCAGCT GGTCGAGGAA 
CGCCCGGCAG AATGA 

 

Protein sequence

MIDPVILYHS THLVVIDKPA GLPSHRGRGG GPSVEDWFPR WRRGADGPWL VHRLDADTAG 
CLAIARRKTT LVALQRAFAQ RRVGKTYWAI VEGVPAAAHG TIELALARRT VPGGWRVAPD 
PRGDPAITDW RCLAAGQGRA LLELRPRTGR THQLRVHCAE SGFPIVGDPL YGTEAGGMCL 
LARALALPLA PPVAVTAALP AHFRAAAAAS ALDLAQLVEE RPAE