| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0722 |
|---|
| Symbol | |
|---|
| ID | 5161174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 807187 |
|---|
| End bp | 808362 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640552638 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001233862 |
|---|
| Protein GI | 148259735 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG CGCGCCCCGA CATCGTCCGG CTGATGGGCG CGCGCGGGGC GCGCAGCATC
GCCCAGGGCG CGCTGGTGGT CGATTTCGCG CTCTACGTCA CCAAACTCGG CTGGAGTGCC
GCGCTTCTCG GCGTCGTCTT CGCCCTGTCG ATCCTGTTCG CCGTCGCGGT GACGACGCTG
GTCGGCCCGG CGAGCGACCG CTTCGGCCGC AAGCGCTTCG TCCTCGTCTA CGAGGCGATC
TCGGTCCTCG CCGCCCTGAT CGGCCTGCTC ACCCAGGCGA CGCTGCCGCT CGCCTTCGCC
GCGGTGATCG GCGGCTTCGG CCGCGGCGCC AACGGCTCGG CCGGCCCCTT CGCGCCGGCG
GAACAGTCCT GGCTGTCCGG CCTGATCGAG AAGCGGGAGT TCGGCACCGT CCTGTCGATC
AACACCGCGA TCGGGTTTTT CGGCATGGGC ATCGGCGCCG TGCTCGCCGG GCTGATCGGC
GCGTCGCGGC CGATGTTCGT CCTGCCGCTC GCGGCCTCGC TCATCGCCAC AATGCTGCTC
GCCCTCACCC CCGATCCGCC GCGTGAGGCC GCAGCCCGGA CGGAGGGGCA CGAAGCCGTC
TCGAAGGCGG AGAACAGCCT GCTCTGGAAG CTCGCCGGTC TCAATATCCT CAACGGCACC
GGGATCGGCC TGTCCGGCCC GTTCATCTCC TGGTGGTTCG CCGCCCGCTA CCATGCGGGG
GCTTCCGCCA TCGGCCCGGC GCTCGCCATC GCCTTCGCCG CCGCCGGCAT CGCCGCGCTG
ACCACCGGGC GGCTGACCCG GCGGCTCGGC ACGGTGCGCG CGGTGGTGCT GATGCGCGGC
ATCGGGCTGG TCAGCCTGTT CGCCCTGCCC TTCTCGCCGA GTTTCGGCGT GGCACTGGTC
GTCTATGCCC TGCGCTCGGC CTTCAACCGC GGCACCGCCG GGGCGCGCCA GGCGGTCGCC
CTCGGCCTCG TGCGCGGCGA GCGGCGGGGA CTTGCCGCCA GCGTCAACAC GATCTCGGTG
CTGCTGCCGC GAGGCATCGC CCCGGCGCTG GCCGGCGTGC TGTTCGAGTC CGGCGCCCTC
GCAGCCCCGT TCCTGCTCGC CGGCCTGTTC CAGGGCGCGT ATCTGGTTAT CTATCCCCGC
GTCTTCGGAC GCCACGATCC TTCGAGGTCC GCATGA
|
|---|
| Protein sequence | MATARPDIVR LMGARGARSI AQGALVVDFA LYVTKLGWSA ALLGVVFALS ILFAVAVTTL
VGPASDRFGR KRFVLVYEAI SVLAALIGLL TQATLPLAFA AVIGGFGRGA NGSAGPFAPA
EQSWLSGLIE KREFGTVLSI NTAIGFFGMG IGAVLAGLIG ASRPMFVLPL AASLIATMLL
ALTPDPPREA AARTEGHEAV SKAENSLLWK LAGLNILNGT GIGLSGPFIS WWFAARYHAG
ASAIGPALAI AFAAAGIAAL TTGRLTRRLG TVRAVVLMRG IGLVSLFALP FSPSFGVALV
VYALRSAFNR GTAGARQAVA LGLVRGERRG LAASVNTISV LLPRGIAPAL AGVLFESGAL
AAPFLLAGLF QGAYLVIYPR VFGRHDPSRS A
|
|---|
| |