| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0707 |
|---|
| Symbol | lysK |
|---|
| ID | 5159498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 788881 |
|---|
| End bp | 790440 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640552623 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_001233847 |
|---|
| Protein GI | 148259720 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1384] Lysyl-tRNA synthetase (class I) |
|---|
| TIGRFAM ID | [TIGR00467] lysyl-tRNA synthetase, archaeal and spirochete |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.407177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGT CCGAAGCCGA TACCCCCACG AGCTGGCCCT TCCGCGAAGC CGAACGCGTC
GTCCATCGCC TGCACAAATC GGGGAAATCC ACGGCCCTGT TCGAAACCGG CTACGGCCCC
TCCGGCCTGC CGCATATCGG CACCTTCATG GAGGTCGCCC GCACCTCCTG GATCAGGCTC
GCCTTCACCA GGCTCACCGG CCTGCCCTCG AAGCTGCTCG CCTTCTCCGA TGACATGGAC
GCCCTGCGCA AAGTCCCCGG CAACGTCCCG CGGCAGGACA TGCTCCGCGA GTTCATCGGC
CAGCCGCTCA CCCGCGTGCC CGACCCCTTC GGCACCCACC CGAGCTTCGG CGCCCACAAC
AACGCCCGCC TGCAAGCCTT CCTCGACTCC TTCGGCTTCG AATACGAATT CGCCTCCTCC
ACCGAATACT ACACCTCCGG CCGCTTCAAC GACGCCCTCC GCGCCGTGGC GGCCAAGCAC
GATGTCATCC GCGACATCAT CCGCCCCACC CTCGGCCCCG AGCGCCGGGC CACCTACTCG
CCCATCCTCC CGCTGCACCC GCGCACCGGC CAGGTCATGC AGGTCGCCAT CGACGAGGTC
GATGTCGATG CGGCGAGCGT CACCTGGCGC GATCCCGAAA CCGGCATCCT CCACGAAACC
TCGATCCTCG ATGGCGGCGC CAAGCTGCAA TGGAAGGCCG ACTGGGCGAT GCGCTGGTTC
GCCCTCGGCG TGGACTACGA AATGTCCGGC AAGGACCTGA TCGATTCCGT CCGCCTCTCC
AGCGCCATCG TCCGCGCCCT GGGCGGCGAG CCCCCCGAGA GCTTCACCTA CGAACTCTTC
CTCGACGAGC ACGGCCAGAA GATCAGCAAG TCGAAGGGCA ACGGCCTCTC GGTCGAGGAA
TGGCTGACCT ACGCCCCGGC CGAAAGCCTC GGCCAGTTCA TGTTCGCCTC GCCCCAGCGC
GCCAAGCGCC TGTATTTCGA CGTGATTCCC CGTGCCACCG ACGAATACCT CGCCAACCAG
GACAATCTCC GCGAGGGCAA GGGCAGGGCG GAGGACAATC CCGCCTGGTT CATCCATGGC
GGCGAGATCC CCACGGCCTC CAGCAGCCCG ATCCCCTTCG CCATGCTTCT CAACCTCGCC
TCGGTGGTCA ACGCCGAAAC CCCCGACCTG CTCTGGGGCT TCATCCGCGC CTACCGGCCG
GAAGCGTCCC CGGAATCGGC CCCCTTCCTC GCCCGCCTGG TCGATTTCGC GGTGCGGTAC
TATCAGGACT TCATCAAGCC CGCGAAACAG TATCGCAGCC CCACCGAGCT GGAACGCACG
GCCCTGCTCG ACCTCGCCGA CGGTCTGAAA TCCATCCCCG ACAACGCCGA TGCCGAGGCC
CTGCAGAACC TGCTCTACGA TGTCGGCAAG CGCCACCCCT TCGCCAGCCT GCGGGAGTGG
TTCGGCTGCC TCTACCAGGT CCTGCTCGGC CAGACCGAGG GCCCCCGCTT CGGCGGCTTC
ATCGCGCTTT ACGGCATCGC CCCCACCATC GCCCTGATCG AACAGGGCCT CGCCCGCTGA
|
|---|
| Protein sequence | MTKSEADTPT SWPFREAERV VHRLHKSGKS TALFETGYGP SGLPHIGTFM EVARTSWIRL
AFTRLTGLPS KLLAFSDDMD ALRKVPGNVP RQDMLREFIG QPLTRVPDPF GTHPSFGAHN
NARLQAFLDS FGFEYEFASS TEYYTSGRFN DALRAVAAKH DVIRDIIRPT LGPERRATYS
PILPLHPRTG QVMQVAIDEV DVDAASVTWR DPETGILHET SILDGGAKLQ WKADWAMRWF
ALGVDYEMSG KDLIDSVRLS SAIVRALGGE PPESFTYELF LDEHGQKISK SKGNGLSVEE
WLTYAPAESL GQFMFASPQR AKRLYFDVIP RATDEYLANQ DNLREGKGRA EDNPAWFIHG
GEIPTASSSP IPFAMLLNLA SVVNAETPDL LWGFIRAYRP EASPESAPFL ARLVDFAVRY
YQDFIKPAKQ YRSPTELERT ALLDLADGLK SIPDNADAEA LQNLLYDVGK RHPFASLREW
FGCLYQVLLG QTEGPRFGGF IALYGIAPTI ALIEQGLAR
|
|---|
| |