| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0393 |
|---|
| Symbol | |
|---|
| ID | 5159693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 450323 |
|---|
| End bp | 451087 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640552310 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_001233537 |
|---|
| Protein GI | 148259410 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.294607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTC GCCGGCAACT TTATGAAGGC AAGGCAAAAA TCCTGTTCGA AGGGCCGGAA
CCCGGCACCC TCGTGCAGTA TTTCAAGGAC GACGCCACCG CGTTCAACGC CCAGAAGAAG
GGCGTGATCA CGGGGAAGGG CGTGTTGAAC AACCGCATCA GCGAGTTCCT GATGCAGCGC
CTCGGCGAAA TCGGCATCCC GACCCATTTC GTCCGCCGCC TCAACATGCG CGAACAACTC
GTGCGCGAGG TCGAGATCAT TCCGATCGAG GTCGTCATTC GCAACGTTGC CGCGGGCAGC
ATGAGCACGC GCCTCGGCAT CCCTGAGGGT ACGCGGCTCC CCCGATCGAT CATCGAATAT
TATTACAAGA ACGACGCCCT GAACGATCCG ATGGTGTCCG AGGACCACAT CACCGCGTTC
GGCTGGGCCA GCACCCAGGA TATGGATGAC ATTGTCCATC TGAGCCTGCG CATCAACGAC
TTTCTCACTG GCCTGTTCCT CGGCGTCGGC ATCGTGCTGG TGGACTTCAA GATCGAGTTC
GGCCGGCTGT GGGAGAACGA CGATATGCGC ATCGTCCTCG CCGACGAAAT CAGCCCGGAC
AATTGCCGTC TCTGGGATGC CAAGACCAAC GAGAAGATGG ACAAGGACCG CTTCCGCCGC
GATCTCGGCC GGGTTGAGGA AGCATATCAG GAAGTCGCCA AGCGTCTCGG AATCCTGCCC
GAGGCCGGGA CACGCGATAT GAAGGGCCCG GAGACGATGC AATGA
|
|---|
| Protein sequence | MARRRQLYEG KAKILFEGPE PGTLVQYFKD DATAFNAQKK GVITGKGVLN NRISEFLMQR
LGEIGIPTHF VRRLNMREQL VREVEIIPIE VVIRNVAAGS MSTRLGIPEG TRLPRSIIEY
YYKNDALNDP MVSEDHITAF GWASTQDMDD IVHLSLRIND FLTGLFLGVG IVLVDFKIEF
GRLWENDDMR IVLADEISPD NCRLWDAKTN EKMDKDRFRR DLGRVEEAYQ EVAKRLGILP
EAGTRDMKGP ETMQ
|
|---|
| |