Gene Acry_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0091 
Symbol 
ID5162136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp101322 
End bp102506 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content61% 
IMG OID640552008 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001233239 
Protein GI148259112 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.666427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGC CCGCCCCCGG AACCGCCAGC GAAACACCCG AGCACAAGAC GAAGAAACCC 
TCGATCCTGC TGCGCATGAT CGTGATGCTC GTGCTTGCGG CCCTCGTGCT CGGCGCGATC
TTCGGCTTCG GCGCGTTCCG CGACGTGATG ATCGCGAAAT TTATCGCCAC GCTGAAGAAC
CCGCCGCAGA CGGTCGCGAC CATGGTCGCG AAGGAAACAC CGTTCCAGAA TACCGAGACG
GCCACCGGCA GCCTCGTGGC GCTTCAGGGA GCCGCTCTCT CGGCACAGGT CGCTGGCATC
GTCAACACGA TCGACTTCAG ATCGGGCCAG GACGTGAACA AAGGCCAGCT CCTGCTCACC
CTTCGTCCGA ACAACGACGA TGCCGTGCTC GCACAGCTGG AAGCGACGGC AAAACTCGAC
GCGATCACCT ATCGGCGTGA TCTCGCCCAG TATCAGGCAC GGGCGGTGAG CGCGCAGACT
GTCGATACTG ACCGGGCCAA TCTCGCCAGC GCCGAAGCGC AGGTGCGCAG CCAGAAGGCG
CTGATGCAGG AGAAAAGGAT TTACGCGCCA TTCTCCGGCA GAATCGGCAT TCGCGCCGTC
GATATCGGTG AGTTCCTCGC CGCTGGCACA ACCATCGCCA CGCTTGAGCA GCTCAACCCG
ATCGCCGTCG ATTTCTACCT GCCGCAGACC GCATTGCGGA CGATTCGGCC GGGCATGAAG
GCCGACATTT CCGTGGACGG ATTCCCCGGC ATCGAGTTCA AAGGAAAGAT CACGGCGCTC
GATTCCGCCG TCGGGACAGC AACGCGCATG ATCCAAATCC GTGCGGTGCT GACCAATCCG
CATGAGGAAC TCCGACCCGG TATGTTCGCG CGGGTCAGCA TTGATGTCGG CGCGCCGCAA
AACGAAATCA CCTTGCCGAA GACGGCAATT GCCTACAATC CTTACGGCGA TACTGTATTT
CTCGTGAAGC CCGACAAGCG GAGCAAGACG CACAAGTCTG CCGAACAGGT TTTCGTGACC
CTGGGACAGA CGCGCGGCGA TCAGGTCGCC GTGCTCAAGG GCCTCAAATC GGGCGACGAG
GTCGTGGTCG CGGGCCAGAT GAAGCTGAAA AACGGCACAC CTGTCGCGAT CAACAACAAG
ATCCTGCCGC AGAACCTGCC CAATCCCTCC GTGCCGAACG AATAA
 
Protein sequence
MTAPAPGTAS ETPEHKTKKP SILLRMIVML VLAALVLGAI FGFGAFRDVM IAKFIATLKN 
PPQTVATMVA KETPFQNTET ATGSLVALQG AALSAQVAGI VNTIDFRSGQ DVNKGQLLLT
LRPNNDDAVL AQLEATAKLD AITYRRDLAQ YQARAVSAQT VDTDRANLAS AEAQVRSQKA
LMQEKRIYAP FSGRIGIRAV DIGEFLAAGT TIATLEQLNP IAVDFYLPQT ALRTIRPGMK
ADISVDGFPG IEFKGKITAL DSAVGTATRM IQIRAVLTNP HEELRPGMFA RVSIDVGAPQ
NEITLPKTAI AYNPYGDTVF LVKPDKRSKT HKSAEQVFVT LGQTRGDQVA VLKGLKSGDE
VVVAGQMKLK NGTPVAINNK ILPQNLPNPS VPNE