Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0029 |
Symbol | |
ID | 5159445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 26325 |
End bp | 28286 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640551943 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_001233177 |
Protein GI | 148259050 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGATC TGTTCGAGCA GGCCGCCGGC CAGGCGAGCT ATTCCGCCAA GGACATCGAG GTTCTCGAAG GGCTGGAACC GGTTCGCCGG CGCCCCGGCA TGTATATCGG CGGCACCGAC GATGCGGCGA TGCACCACCT CGCCGCCGAA CTGCTCGACA ACGCGATGGA CGAGGCCGTA GCCGGCCACG CCTCGATCAT CGAGATGACG CTTGCGCCCG GCAACCTGCT CACGGTGCGC GATAACGGGC GCGGCATCCC GGTCGATCCG CACCCGAAAT TCCGCGACAA GTCGGCACTC GAGGTGATTC TCACCACCCT GCATTCCGGC GGCAAGTTCG CCGGCAAGGC CTATGCCACC TCGGGCGGTC TGCACGGCGT CGGCTCTTCG GTGGTGAACG CACTGGCCGA GCGGCTGGAG GTCGAGGTCG CCCGCGAGAA AACCCTCTGG AAACAGGATT ATGCCCGCGG CAAGCCGCTG ACCAAGCTGG TCAATGCCGG GGCGACGCCG AACCGGCGTG GCACGCTGAT CCGCTTCGTC CCCGATCCCG AGATTTTCGG CGACAAGAAG TTCAGCCCGG CGCGGCTCTA CCGCATGTGC CGCTCGAAGG CCTATCTGTT CCGCGGCGTG CGGATCCGCT GGACGTGCGA TGCGGCGCTG ATCGCGGCGG GTGCCGATGT GCCGGCGCAG GCGGAGCTGC ATTTCCCCGG CGGCCTCGCC GATTCGCTGG CGGAGGAACT GGGCGCCGCG CCGAAGCTCG TCGCCCCGGT CTGGGCCGGG CAGGCCGACC TGCCGGACGA TGCCGGGCGG ATCGAGTGGG CCTGCGCCTG GCTGGAAGCC GGCGAGGCCA CGCTCTCGAC CTATTGCAAC ACGATCCCGA CGACGCTCGG CGGCACGCAT GAGGCGGGGT TCCGCGCCGC CCTGCTCAAG GGCCTGCGCG GCTTCGGCGA GCAGCGCAGC AACAAGCGCG CCGCGGTGAT CACCGCCGAG GATGCGACCG GCGCGCTCGC CGCCAAGCTC TCGCTGTTCA TCCGCGACCC GCAATTCCAG GGCCAGACCA AGGAAAAGCT GACCTCGCCC GAGGCGCAGA AACTGACCGA GGCGGCGCTG CGCGACCGGT TCGAGCATTT TCTCACCGGC GATCCGGCGA ACGCCGACAA TCTTCTCGCC TTCGTGATCG AGCGGGCGGA GGAACGCATC CGCCGCCGCG AGCAGAAGGA CACGCCGCGC AAATCCGCCA CGCGACGCCT TCGCCTGCCC GGCAAGCTGA CCGATTGCTC GCGCGAGAGC CGCGAGGATA CCGAGATCTT TCTGGTCGAG GGCGATTCGG CTGGCGGCTC GGCCAAGCAG GCGCGCAACC GCGAGACCCA GGCGGTGCTG CCGCTGCGCG GCAAGATCCT CAACGTCGCC TCCGCCTCCA CGGAGAAGCT CCGGCAGAAC CAGGAACTGA AAGACCTGAT CGAGGCGCTG GGCTGCGGCG TCGGCGACCG GTTCCAGATC GACGCGCTGC GCTACGGCCG GATCATCATC ATGACCGACG CCGATGTTGA CGGTGCTCAC ATCGCGTCGC TGCTGATGAC GTTCTTCTAC CGCGAGTTGC CGGAACTGAT CCGCGGCGGC CATGTCTATC TCGCCCAGCC GCCGCTCTAC CGCCTCACCC AGGGCGGCAA GTCGGTCTAT GCGATGGACG ATGGCGAACG CGACCGGCTG GTGAAGACGG CGTTCAAGGC GAACGCCAAG GTCGAGATCA GCCGCTTCAA GGGGCTTGGC GAGATGCCGC CGGCAATTCT CAAGGAAACC ACGATGGACC CGAAGCGCCG CGTGCTGCTG CGCGTTCTCG CCCCGCCCGA GGCACGAGCT GAAACGGCGG AAATCGTCGA GAGCCTGATG GGGCGGAAGC CCGAGCTGCG CTTCCGCTTC ATCCAGGACC ATGCCTCGAG CGTGCAGGAA CTCGACGTCT GA
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Protein sequence | MTDLFEQAAG QASYSAKDIE VLEGLEPVRR RPGMYIGGTD DAAMHHLAAE LLDNAMDEAV AGHASIIEMT LAPGNLLTVR DNGRGIPVDP HPKFRDKSAL EVILTTLHSG GKFAGKAYAT SGGLHGVGSS VVNALAERLE VEVAREKTLW KQDYARGKPL TKLVNAGATP NRRGTLIRFV PDPEIFGDKK FSPARLYRMC RSKAYLFRGV RIRWTCDAAL IAAGADVPAQ AELHFPGGLA DSLAEELGAA PKLVAPVWAG QADLPDDAGR IEWACAWLEA GEATLSTYCN TIPTTLGGTH EAGFRAALLK GLRGFGEQRS NKRAAVITAE DATGALAAKL SLFIRDPQFQ GQTKEKLTSP EAQKLTEAAL RDRFEHFLTG DPANADNLLA FVIERAEERI RRREQKDTPR KSATRRLRLP GKLTDCSRES REDTEIFLVE GDSAGGSAKQ ARNRETQAVL PLRGKILNVA SASTEKLRQN QELKDLIEAL GCGVGDRFQI DALRYGRIII MTDADVDGAH IASLLMTFFY RELPELIRGG HVYLAQPPLY RLTQGGKSVY AMDDGERDRL VKTAFKANAK VEISRFKGLG EMPPAILKET TMDPKRRVLL RVLAPPEARA ETAEIVESLM GRKPELRFRF IQDHASSVQE LDV
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