Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0007 |
Symbol | |
ID | 5161159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 7746 |
End bp | 9536 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640551921 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001233155 |
Protein GI | 148259028 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.419421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTCT ACAAGGCGCC GCTCAAGGAC ATGCGCTTCG TCCTGCACGA GCTCTATGAC AGCACCGCCA TCGCCGAGCT TCCCGGCAAT GCCGACTTCA CCCCCGAACT GATCGACAGC GTGCTGGAGG AAGCCGCGAA GATCAGCGAG GAGGTGCTGT TCCCGCTCAA TCAGGTGGGC GACCGCGAGG GCTGCACCTA TGAAAACGGC GTCGTCCGCA CGCCGACCGG CTATCGCGAG GCGTACCACA CTTTCTGCGA GGGCGGCTGG ACCTCGATTT CCGCTGACCC GGATTATGGC GGGCAGGGCA TGCCGCTGAC CGCGGCGATG ATGGTCGAGG AGATGTTCTG CTCCGCCAAT GTCGCGTTCG GCCTCTACCC CGGGCTGAGC CACGGCGCCT ATGTCGCGCT GAAGCATTCG GGGTCGGACG AGCAGAAGAA GGCCTGGCTT CCCAACATCG TCTCCGGCAA GTGGACCGGC ACGATGTGCC TGACCGAGCC GCATTGCGGC ACCGATCTCG GCATGCTCCG CACCAAGGCG GTGCCGAACG ATGACGGCAC CTACAGCATC ACCGGCAACA AGATCTTCAT CAGTGCCGGC GAGCACGACC TTGCGGAAAA CATCGTCCAT CTCGTCCTCG CCCGCCTGCC GGACGCGCCG GCCGGAGTGA AGGGCATCTC GATGTTCCTG GTGCCCAAGT TCCTGCCGCG CGAGGATGGC ACGCTGGGCC CGCGCAACGG CATGCAGTGC ACCGCGATCG AGCACAAGAT GGGGCTGAAC GGCTCCGCCA CCTGTGCGAT GAGCTTCGAC GGCGCGACCG GCTGGCTCGT CGGCGAGCCG AACAAGGGCC TCGCCGCGAT GTTCAAGATG ATGAACACCG AGCGTCTCTC CGTCGGCATC CAGGGGCTCG GCATCGCCGA GGTCGCTTAT CAGAACGCCG TGGCCTATGC GCGCGAGCGC ATCCAGGGCC GCTCGCTCAC CGGCACCAAG GCGCCGGAGA AGCAGGCGGA CCCGATCCTC GTCCACCCCG ATGTGCGGCG GATGCTGCTG ACCAGCCGCG CCTATATCGA GGGCTGCCGG GCGCTGGCCG GCTGGGTCGC GCGCGAGCTG GAAATCCTCG AGAAGTCGGA TGACGGTGAT GCGAAGCAGG CGGCCGACGA TTTCGCCTCG CTGATGACGC CGGTGGTCAA GGCGATGTTC ACCGATCTCG GTTTCGAGAT CGCCTCGCTC GCGGTGCAGA CCTATGGCGG CCATGGCTAT ATCCGCGATC ACGGCATCGA GCAGTATGTG CGCGATGCGC GGATCGCAAT GCTCTACGAG GGGACCAACG GCATCCAGGC GCTCGACCTC GTCGGCCGCA AGCTGCCGCA GGATGGCGGG AGACTGCTGA CCCGCTTCCT CGATCCGGTC CTCGAATTCA TCGACGCGCA TCAGGATAAC GACGCCCTCG CCGAGTTCCT GCCCGCGCTG TCGCAGGCGC TGGAGCATGT GCAGGAAGCG ACTGGCCTCA TCATGGAAGG TGCGATGACC AATCGCGACG AGGTGGGGGC GGCGTCGGTC GACTATCTCC GCCTGTTCGG CCTCGCGTCA CTCGCCTTCG TCTGGGCCCG CATGGTCGCG GTGGCTGCCC CCAAGGCCGG GGAGGACGGC GAGGCCGCGC AGTTCTACCG CGCCAAGGTG CAGACCGCGA AATTCTTCAT GGAACGCCTC CTGCCGCAGA CCGGCGCGCT GCTCGCCGCG ATCCGGTCGG GCGCTGCGAC CATGATGGAA TTCGAGGACG CCGCGTTCTG A
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Protein sequence | MPVYKAPLKD MRFVLHELYD STAIAELPGN ADFTPELIDS VLEEAAKISE EVLFPLNQVG DREGCTYENG VVRTPTGYRE AYHTFCEGGW TSISADPDYG GQGMPLTAAM MVEEMFCSAN VAFGLYPGLS HGAYVALKHS GSDEQKKAWL PNIVSGKWTG TMCLTEPHCG TDLGMLRTKA VPNDDGTYSI TGNKIFISAG EHDLAENIVH LVLARLPDAP AGVKGISMFL VPKFLPREDG TLGPRNGMQC TAIEHKMGLN GSATCAMSFD GATGWLVGEP NKGLAAMFKM MNTERLSVGI QGLGIAEVAY QNAVAYARER IQGRSLTGTK APEKQADPIL VHPDVRRMLL TSRAYIEGCR ALAGWVAREL EILEKSDDGD AKQAADDFAS LMTPVVKAMF TDLGFEIASL AVQTYGGHGY IRDHGIEQYV RDARIAMLYE GTNGIQALDL VGRKLPQDGG RLLTRFLDPV LEFIDAHQDN DALAEFLPAL SQALEHVQEA TGLIMEGAMT NRDEVGAASV DYLRLFGLAS LAFVWARMVA VAAPKAGEDG EAAQFYRAKV QTAKFFMERL LPQTGALLAA IRSGAATMME FEDAAF
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