| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4769 |
|---|
| Symbol | |
|---|
| ID | 4073363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5635303 |
|---|
| End bp | 5636037 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637986813 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_593842 |
|---|
| Protein GI | 94971794 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0153569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00905768 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCAG ACCTCGAACG CCTGATCGAG CTGCAATCTG TCGATTCCGA CATCGCCCGC
CTGAACGCCG AGGTGGCCAC TCTTCCCAAG AAAATGGCCG CGATCGAGAC CAAGCTGAAC
GCCTCCAAAG CCCAGATTGA GAAGGTGAAA GCCGCGACGC AGGCCGGAGA CAAGGCCAAA
CGCGGCTTTG AGGGCGACAT CCAGGCGCAG CAGCAGAAGA TCTCGAAGTA CAAAGACCAG
TCGCTGAATG TAAAGACCAA CCCCGAATAT AAGGCGCTGA TGCAGGAAAT TCAGTTTGCC
GAACAGGCCA TCAAGGGCTT GGAAGACAAG ATCCTCGAAA TCATGCTCGA TGCCGACACC
CGGAAAGACG AGCTGAAGAA GGCCGAAAAC GAGCTGAAGT CCGAGACTGC TGAGATTGAG
CGGGAGAAGG AACAAGCCCG GCAGATCACC GCCAAGGACG AAGCCGAACT CAAGATCGAA
AGCGCCAAGC GCGATGAGCT GCGCACGGCG ATCGCACCTG AGGTCCTTAC CCATTACGAC
CGGGTGGCCA AGTTTCGCGG GACGGGGCTG GCGGTCGAAA AGAACGGGAT GTGCATGGGA
TGCCGGGTTT ACCTGCGTCC GCAGGTGTTG CAGCACGTGC ACACGAACAA CGAGATCATC
TATTGCGACC AGTGCCAGCG GGTGCTGTAC TCGGAAGCGC CGGCAATCGC GCCACCGACG
GAAACCACGC CTTAA
|
|---|
| Protein sequence | MHPDLERLIE LQSVDSDIAR LNAEVATLPK KMAAIETKLN ASKAQIEKVK AATQAGDKAK
RGFEGDIQAQ QQKISKYKDQ SLNVKTNPEY KALMQEIQFA EQAIKGLEDK ILEIMLDADT
RKDELKKAEN ELKSETAEIE REKEQARQIT AKDEAELKIE SAKRDELRTA IAPEVLTHYD
RVAKFRGTGL AVEKNGMCMG CRVYLRPQVL QHVHTNNEII YCDQCQRVLY SEAPAIAPPT
ETTP
|
|---|
| |