Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4766 |
Symbol | |
ID | 4070704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5633060 |
End bp | 5633551 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637986810 |
Product | heat shock protein Hsp20 |
Protein accession | YP_593839 |
Protein GI | 94971791 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000408851 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00874264 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGTTA TTACCCGTTG GAACCCCGCT TTCCGTGAAC TTGCGACCTT GCAGGGCCGT TTAAACCGTC TGCTTCACGA GACCGCGGGC GGCGAAGAGA CCAGCCTGAC GACTTCCGGC GCGTTCGTTC CTCCGGTTGA TGTCTACGAA GACGAGCAGG GCCTGCGGTT GAAGCTCGAA GTACCGGGGA TCGACGAGAA GGATCTCGAT GTCAGCATTG AGAACAACAC CCTGACGGTT CGCGGCGAGC GCAAGTTCGA GAAGGAAGAA AAGGAAGAGA ACTTCCGTCG CGTCGAGCGC CGCTATGGGT CGTTCGTGCG CAGCTTCACC CTTCCAACCA CGGTGGACGC CGAGAAAGTG ACCGCCGCCT ACAAGAACGG CGTTCTTGAG CTGGCGCTCG GTAAGAAGGC GGAAGCCAAG CCGAAGCAGA TCAAGGTGAA TGTCGGATCG GAGCCGTCGA CGGAAATGAA GAAGAGCGCA AGCGCGGCGT AA
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Protein sequence | MTVITRWNPA FRELATLQGR LNRLLHETAG GEETSLTTSG AFVPPVDVYE DEQGLRLKLE VPGIDEKDLD VSIENNTLTV RGERKFEKEE KEENFRRVER RYGSFVRSFT LPTTVDAEKV TAAYKNGVLE LALGKKAEAK PKQIKVNVGS EPSTEMKKSA SAA
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