Gene Acid345_4766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4766 
Symbol 
ID4070704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5633060 
End bp5633551 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID637986810 
Productheat shock protein Hsp20 
Protein accessionYP_593839 
Protein GI94971791 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000408851 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00874264 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGTTA TTACCCGTTG GAACCCCGCT TTCCGTGAAC TTGCGACCTT GCAGGGCCGT 
TTAAACCGTC TGCTTCACGA GACCGCGGGC GGCGAAGAGA CCAGCCTGAC GACTTCCGGC
GCGTTCGTTC CTCCGGTTGA TGTCTACGAA GACGAGCAGG GCCTGCGGTT GAAGCTCGAA
GTACCGGGGA TCGACGAGAA GGATCTCGAT GTCAGCATTG AGAACAACAC CCTGACGGTT
CGCGGCGAGC GCAAGTTCGA GAAGGAAGAA AAGGAAGAGA ACTTCCGTCG CGTCGAGCGC
CGCTATGGGT CGTTCGTGCG CAGCTTCACC CTTCCAACCA CGGTGGACGC CGAGAAAGTG
ACCGCCGCCT ACAAGAACGG CGTTCTTGAG CTGGCGCTCG GTAAGAAGGC GGAAGCCAAG
CCGAAGCAGA TCAAGGTGAA TGTCGGATCG GAGCCGTCGA CGGAAATGAA GAAGAGCGCA
AGCGCGGCGT AA
 
Protein sequence
MTVITRWNPA FRELATLQGR LNRLLHETAG GEETSLTTSG AFVPPVDVYE DEQGLRLKLE 
VPGIDEKDLD VSIENNTLTV RGERKFEKEE KEENFRRVER RYGSFVRSFT LPTTVDAEKV
TAAYKNGVLE LALGKKAEAK PKQIKVNVGS EPSTEMKKSA SAA