| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4750 |
|---|
| Symbol | |
|---|
| ID | 4070688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5614887 |
|---|
| End bp | 5615447 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637986794 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_593823 |
|---|
| Protein GI | 94971775 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0775473 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCC CTCGCCACGC CGTCCTCCTC ATCGTTGACG TCCAATCCGG CTTCGAGGAC
GAAGCCCACT GGGGACCGCG TAACAATCCC GACGCCGAGA AGAACATCGC CCGCATGTTG
GAAGCTTTCC GCGAGGCTGG GCGACCGGTC ATTTTCATCC AGCACATGTC ACAGGAACCG
AACTCCCCAC TGCGCAGTAG TGAGCCCGGC AACGCCATCC ATCCTCTGGT CGCGCCCAAA
GGCGAACGCG TCTTCCAGAA GACGGTTCAC TCCGCGTGGA TCAACACCCC GCTCGAGCGC
ACCCTTCGTG CCGCCGCCCA GGACACTCTC GTCGTCTGTG GCCTCACCAC CGACCACTGC
GTCTCCACCA CCACGCGCAT GGGTGCCGAC ATGGGTTTCA CCATCTACCT GGTGGACGAC
GCCTGCGCCT GTCACGACCG CAAAACCCGC GACGGCCGCA CAATTCCCGC AGCACAGGTG
CACGAGAGTG AACTCGCAGC TCTGCACAAT GAGTTTGCAA CGGTCACAAC AACGGATGAA
GTTTTACAGG CTGTAACTTA G
|
|---|
| Protein sequence | MNLPRHAVLL IVDVQSGFED EAHWGPRNNP DAEKNIARML EAFREAGRPV IFIQHMSQEP
NSPLRSSEPG NAIHPLVAPK GERVFQKTVH SAWINTPLER TLRAAAQDTL VVCGLTTDHC
VSTTTRMGAD MGFTIYLVDD ACACHDRKTR DGRTIPAAQV HESELAALHN EFATVTTTDE
VLQAVT
|
|---|
| |