Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4634 |
Symbol | |
ID | 4070791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5493171 |
End bp | 5495195 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637986674 |
Product | helicase c2 |
Protein accession | YP_593708 |
Protein GI | 94971660 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCAGTA GCTCACAATC CGCGGCAAGT CCGGCTCGCG ACATCCGTTC GCTCACCCTG TCGCAGTTCT TCGGACCGGG CGGTGTGCTG GCGAAATCGC ATCCGGCATA TGAGTTCCGG CGCGGGCAGT TGCAGATGGC GCAAGCCGTG GAACAGGCGC TCACCGAGAA GCGGCACCTG ATCGTTGAGG CCGGGACAGG AACCGGCAAG ACGTTGGCGT ATCTCGTGCC AGTGATTCGC TCGGGACTGC GCGTGATCAT TTCGACGGGC ACGAAAAATC TCCAGGAGCA GCTCTTCTAT AAAGATGTTC CCTTCCTCGA GCGCGCGATT TTCGGCGCGG AGTCAGACCA GAAGTTGAAG GTCTGTTACA TGAAGGGGCG CAACAATTAT CTGTGCCGCA AGAAGCTGTA TGACCTAAGC GACCGGCCGG TGCTCAACGG CCTGGAAGAG ATTGACCAGT TCCGGCAGAT CCGCGAGTGG GAGGCCGTGA CCACGACCGG CGACCGCGCG GAGTTGACCG CCGTTCCCGA GGCCAGCCTG CTCTGGCCAA AGCTCGACGC GCGCGCGGAC GCGTGTGTCG GCTCGAAGTG CAAAGATTTC GAGCGCTGCT TCATCACCGA GATGCGTCGT ACGGCAATGG AGAGCGACAT CATCATCGTC AATCACCATC TGTACTTCGC CGATCTCGCG ATTAAGCAGG CGGCGGATGG CGCGCCGGAT GTCGGCATTC TGCCGGAAGC CGCGGCAGTA ATCTTCGACG AGGCGCACGA ACTCGAAGAC GTCGCGGGCA GCTACTTCGG GGTGAGCGCG TCGAACGTGC GCGTGGACGA CCTGGTGCGC GATGTTGAAT TCGCAATCAA GGAATTTCAT ATCGCGTCTC CGACGCTGTT GCAGGCTTCG CAGCGAGCCC GCGAACGCTC GCAGTTGTTC TTCTCGCTGG TTCCACAGGG CGAAGGGCGA TTCGCGTTCG AGAACCGTAA GGAATTTCTG GAAGAGAACG GGGAAGAGTT TCTCGCGCTG CAGAATGCGC TGGGGCATCT CTACAGTGAA ATTCAGGCGT TAAAAGAGAA ACCGGATGAG TTGTTCAACC TGGCTCGACG CACCGAAGAA CTGCGAGTAC AGCTGAGTTT CCTGCTGGAA TCGAATGACA AGAACACTGT GTATTGGGTG GAGCGTCGAG GCGAGTCGCG CCGCGCTGGA AGGCAGGGAC ACAACGTGTT TTTGCAGGCG ACGCCGATTG ATGTGTCGGC AATCCTGCAG CGCACCTTGT TTGCAAATTT GAACACCGCG GTGTTGACCT CGGCGACGAT CGCCGTCGGC GGCGGCTTTC AATACGCCCG CGGACGATTA GGGCTACAGG ATGCACGCGA ACTCGTCGTG CCCTCGCATT TCGACTACGA GACGCAAGCG GTGTTCTACG TGCCGCCAGA TATGCCTGAT CCGCGCGAGC AATTGTTTTC GCGCAAGGCG GCCGATCGCA TCCGCCAACT GCTGGAGATC ACGCGTGGGC GCGCCTTCTG CCTGTTCACC AGCTACGCGC AGATGAACGA CGTCTACGAC CGGCTGCTCG GGGAACTCGA TTATCCGATG CTGAAGCAGG GCGATGCACC GAAATCAGCA CTGCTCGAAG AGTTCCGCAC TACGCCCGGT GCGGTGCTGT TCGCGACCAG TTCTTTCTGG CAGGGCGTGG ATGTGCAGGG CGAACAGCTG AGCTGCGTCA TCATCGACCG GCTGCCGTTC GCGGTGCCGA ACGATCCCGT GGTTGCCGCG CGGATCCGCG CCATTGATGC CGATGGCGGC AATGCGTTCT TCGACTACCA GGTGCCGAGC GCGGTCATCG CGTTGAAGCA GGGCTTCGGC AGGCTGATCC GCTCCCTGCA CGATCGCGGC GTGGTGTGTC TACTCGATAA TCGAATTCTG AAGAAGCAAT ACGGACGTGT GTTTGTGGAG AGCCTGCCAA AATACTGGCG TACGACCGAC ATTCGTAAGG TCGAGGAGTT TTTCGCAGGG CCCGAAGCGG ATTAG
|
Protein sequence | MASSSQSAAS PARDIRSLTL SQFFGPGGVL AKSHPAYEFR RGQLQMAQAV EQALTEKRHL IVEAGTGTGK TLAYLVPVIR SGLRVIISTG TKNLQEQLFY KDVPFLERAI FGAESDQKLK VCYMKGRNNY LCRKKLYDLS DRPVLNGLEE IDQFRQIREW EAVTTTGDRA ELTAVPEASL LWPKLDARAD ACVGSKCKDF ERCFITEMRR TAMESDIIIV NHHLYFADLA IKQAADGAPD VGILPEAAAV IFDEAHELED VAGSYFGVSA SNVRVDDLVR DVEFAIKEFH IASPTLLQAS QRARERSQLF FSLVPQGEGR FAFENRKEFL EENGEEFLAL QNALGHLYSE IQALKEKPDE LFNLARRTEE LRVQLSFLLE SNDKNTVYWV ERRGESRRAG RQGHNVFLQA TPIDVSAILQ RTLFANLNTA VLTSATIAVG GGFQYARGRL GLQDARELVV PSHFDYETQA VFYVPPDMPD PREQLFSRKA ADRIRQLLEI TRGRAFCLFT SYAQMNDVYD RLLGELDYPM LKQGDAPKSA LLEEFRTTPG AVLFATSSFW QGVDVQGEQL SCVIIDRLPF AVPNDPVVAA RIRAIDADGG NAFFDYQVPS AVIALKQGFG RLIRSLHDRG VVCLLDNRIL KKQYGRVFVE SLPKYWRTTD IRKVEEFFAG PEAD
|
| |