Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4629 |
Symbol | |
ID | 4070786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5486264 |
End bp | 5487598 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637986669 |
Product | tRNA (uracil-5-)-methyltransferase Gid |
Protein accession | YP_593703 |
Protein GI | 94971655 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.838126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATTTGA AGATCAGGAT TATTGGTGCG GGGTTGGCGG GGTGTGAAGC GGCGTGGCAG TGTGCGCGGC GCGGGCTTGA TGTGGAATTG TATGAGATGC GTCCGGTGAA ATCGACGCCG GCGCACCAGA CTTCGGACTT TGCGGAGCTG GTGTGTTCGA ACTCGCTGAA ATCCGCGGGC GAGAATTCGG CGCCCTGGCT GCTGAAGGAA GAGATGCGGC GAGGCGGGTC GCTGCTGCTG GAGATTGCGC AGAAGACTTC GGTTCCCGCG GGACATGCGC TGGCGGTGGA CCGTGGGGCG TTTGCCGCGG AAGTCACGCG GGTGATTGAA GCGGAGCCAC GGATTCGCGT GGTGCGCGGG GAAGTCACGA AGATCGATGA AAACGATGCG CTCACGGTGA TTGCGACGGG GCCGCTGACT TCGGATGCGC TGTCGCAGGA GATCGCGCGG CTTTCGGGTA ACACCCACCT CTATTTCTAC GATTCAATTT CGCCGATTGT GGAGGCGGAC TCGATCGATA TGTCGCGCGT ATACATGGCC GCGCGCTATG ACAAGGGCAC GGCGGACTAC ATCAATTGTC CGATGAACAA AGAGGAGTAC GACCGCTTTC TTGATGCGCT GATCGAGGCG CACTCGGTGG ATGCGAAGGA GTGGGAGAAC CTCAACTATT TCGAGGGCTG CCTGCCGATC GAGGAGATTG CGCGGCGGGG ACGCGACACG CTGCGCTTTG GGCCGATGAA GCCGGTGGGG CTGACGGATC CGAAGACGGG ACGGTATCCG TATGCGGTGG TGCAGTTGCG GCAGGAGAAC CTGCGCGCCG ATTCGTACAA CCTGGTTGGG TTCCAGAACC ACTTGAAGTA TGGCGACCAG GCGCGGGTGA TGCGGCTGAT CCCCGGGCTC GAGAATGCGA AATTCCTGCG CTATGGGCAG ATTCATCGCA ATACGTACAT CAACTCGCCG ACGCTGCTGA CCGAGACGCT GCGGATGAAA GAGCATCCCA ACGTGTTTTT CGCGGGGCAG ATTTCGGGCG TTGAAGGATA CGTGGAGAGT ATCGCGACAG GACAGATGGC GGGGATGCAT GTGAGCACCG TGGCGATGGG ACACGAACCG GTAGCGCCGC CGCGGGCGAC GGCGTTTGGA TCGCTGGTGA ATTACATCTG TCATGCCGAA GCGAAACATT TTCAGCCGGC GAATATTACG TTCGATTTGC TGCCGCAACT CGATGAAGCG GCGCGGCGCA AGGTGCGCGA CAAGAAGGAG CGGCATCGGA TGGTGTGCGA GGCAGCGCTG AAGGAATTTG ATGGGTGGCT GGCTACATCC CAGATATTCC AATAG
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Protein sequence | MNLKIRIIGA GLAGCEAAWQ CARRGLDVEL YEMRPVKSTP AHQTSDFAEL VCSNSLKSAG ENSAPWLLKE EMRRGGSLLL EIAQKTSVPA GHALAVDRGA FAAEVTRVIE AEPRIRVVRG EVTKIDENDA LTVIATGPLT SDALSQEIAR LSGNTHLYFY DSISPIVEAD SIDMSRVYMA ARYDKGTADY INCPMNKEEY DRFLDALIEA HSVDAKEWEN LNYFEGCLPI EEIARRGRDT LRFGPMKPVG LTDPKTGRYP YAVVQLRQEN LRADSYNLVG FQNHLKYGDQ ARVMRLIPGL ENAKFLRYGQ IHRNTYINSP TLLTETLRMK EHPNVFFAGQ ISGVEGYVES IATGQMAGMH VSTVAMGHEP VAPPRATAFG SLVNYICHAE AKHFQPANIT FDLLPQLDEA ARRKVRDKKE RHRMVCEAAL KEFDGWLATS QIFQ
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