| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4470 |
|---|
| Symbol | purH |
|---|
| ID | 4070953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5304131 |
|---|
| End bp | 5305702 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637986509 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_593544 |
|---|
| Protein GI | 94971496 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA TTCGTCGCGC TATTCTCTCC GTTACTGACA AAATCGGCCT GTCCGACTTC
GCACGCACGT TGGCGAAGCA TGGCGTTGAA CTGATCTCCA CCGGCGGCAC GGCGAAGATG
CTGCGCGACG CCGGCATCCC CGTCAAAGAC ATCTCCGAAT TGACCGGCTT TCCCGAGATG
CTCGATGGCC GCGTGAAGAC CCTTCACCCC AAGGTGCATG GCGGCATCCT GCACCTGCGC
GCCAACGAAG AGCACGTGGC GACGGTGAAA GAGCACGGCA TCCAGCCAAT CGACATGGTG
GTGGTGAACC TGTACGCGTT CGAAAAGACG GCATCGAAGC CCGGGGCGCA CTTCGAAGAA
ATCATCGAGA ACATCGATAT CGGCGGGCCG AGCATGGTGC GCTCGGCGGG CAAGAATTTC
CAGGACGTGG CGATCGTCAC TTCGCCCGAC CAGTACGCGC AGGTCGCTGA AGAGATGGAC
AAGAGCGGCG GTTCGGTTTC CAAGCAGATG CATTGGAAGC TGGCGCAGCG CGCGTTCGCC
ACGACCGCCG CGTACGACTC AGCAATTGCT TCGGCGCTGG AGCGCGTGAT GGTGGACGAT
GCCGGAAAGT TCGACATATC GAACATCCAC GGCGGCACTG GTTTCCCTGA GATCTTGCGA
CTATTGTTCC GCAAATCCAT GGATCTTCGC TACGGCGAGA ACCCGCACCA GAAGGCGGCG
CTCTACTCCA ACGGCACCGA TCTTGGCGTC GCCAACGGCA AGCAGCTCCA GGGCAAGGAG
CTTTCGTACA ACAATATCGT CGATCTGCAG GCAGCGTGGG ACCTGGCGCA GGAGTTCGAT
GAGCCCGTCT GCGCGATCAT CAAGCACACC AATCCGTGCG GCACGGCAGT CAGTTCGATA
CTTGTCGAAG CGTATAAACG TGCTCTCGAA GCCGATCCGG TTTCGGCGTT CGGGGGTGTG
ATTGGCGTAA ACCGCGAGAT CGACGAAGCA ACAGCGGAAG AAATGGCGAA GCTTTTCCTC
GAAGTGATCG CCGCTCCGAG TTTCAGCGAG GGAGCGAAGG CGCGCTTCGC CGCGAAGAAG
AACTTGCGGC TCGTCGAAGT AAAGGCGCTC GACCAGAAAT ACACGCTGAA GAATGTATCC
GGCGGCGTGC TGGTGCAGGA CAACGACATT CGTCCGCTGA CCGACGCAGA TTTGAAAGTT
GTCAGCGAGC GCAAGCCCAC TGAATCCGAG ATGAAGGACC TGCTCTTCGC GTGGAAGGTC
TGCAAGCATG TGAAATCGAA TGCGATCCTC TACGCGAAAG ACGGCCGCAG CGTGGGCGTG
GGCGCCGGCC AGATGAGCCG CGTGGATTCA GCGCGCATCG GTGCGATGAA AGCCGTGTTG
CCTCTGAAGG GTTGCGTCGC GGCGAGCGAT GCGTTCTTCC CGTTCCCTGA TGGAGTCGAA
GTCATCGCCG AAGCTGGAGC GACGGCGATC ATCCAGCCTG GCGGATCAGT GAAAGACCAG
GAAGTGATTG ACACCGCGAA CCGGTTGGGA CTGGCAATGG TGCTCACGGG TGTGCGGCAC
TTCCGGCACT AA
|
|---|
| Protein sequence | MAKIRRAILS VTDKIGLSDF ARTLAKHGVE LISTGGTAKM LRDAGIPVKD ISELTGFPEM
LDGRVKTLHP KVHGGILHLR ANEEHVATVK EHGIQPIDMV VVNLYAFEKT ASKPGAHFEE
IIENIDIGGP SMVRSAGKNF QDVAIVTSPD QYAQVAEEMD KSGGSVSKQM HWKLAQRAFA
TTAAYDSAIA SALERVMVDD AGKFDISNIH GGTGFPEILR LLFRKSMDLR YGENPHQKAA
LYSNGTDLGV ANGKQLQGKE LSYNNIVDLQ AAWDLAQEFD EPVCAIIKHT NPCGTAVSSI
LVEAYKRALE ADPVSAFGGV IGVNREIDEA TAEEMAKLFL EVIAAPSFSE GAKARFAAKK
NLRLVEVKAL DQKYTLKNVS GGVLVQDNDI RPLTDADLKV VSERKPTESE MKDLLFAWKV
CKHVKSNAIL YAKDGRSVGV GAGQMSRVDS ARIGAMKAVL PLKGCVAASD AFFPFPDGVE
VIAEAGATAI IQPGGSVKDQ EVIDTANRLG LAMVLTGVRH FRH
|
|---|
| |