Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4404 |
Symbol | |
ID | 4073310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5228789 |
End bp | 5230606 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637986437 |
Product | GTP-binding protein TypA |
Protein accession | YP_593478 |
Protein GI | 94971430 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTAAGG CACTTCGCAA CATCGCCATT ATTGCGCACG TCGATCACGG CAAAACCACG CTGGTCGACG CCATGTTGAA ACAATCCGGC ACCTTCCGCG CCAACGAACA GGTCGCCGAC CGCGTAATGG ACAGCAACGA GCTCGAACGC GAGCGCGGCA TCACCATCCT CGCGAAAAAC ACCGCGGTCT TTTATCACGA CATCAAGATC AACATCGTGG ATACGCCCGG CCACAGTGAC TTCGGCGGTG AAGTCGAGCG CGCCCTCAAA ATGGTCGACG GCGTCATGCT CCTCGTGGAC GCCTCCGAAG GCCCACTGCC GCAAACGCGT TACGTGCTCG GCAAGGCGCT GGAAGCGAAC CTTCCGCCCA TCGTCGTGAT CAACAAGATT GACCGCCCCG ACGCGCGCGC CCAGGAAGTA TTGAACGAGA TCTACGACCT CTTCATCGAT CTCGACGCAA AGGAAGAGCA GCTCGAATTC CCGGTCCTCT ACACCAATGC GAAGATCGGC ACCGCCTCCA CCGATGCGAA AGTCGCGGGC GAAGACCTGC AGCCGCTCTT CGAAGCCATC GTCAAAACCA TTCCTCCGCC GAAGGGCAAA ACCGACGGGC CTCTGCAAGT CCTCGTCGCC AACCTCGACT ACAGCGATTA CCTCGGCCGC ATCGCCATCG CCCGCGTCTT CAACGGCACC CTCTTCACGG GCGAAGATGT CGTCATCGCC AAGCTCGACG GCTCGTTCCA CAAAACGAAA ATCACGAAAC TGTTCTCATT CAGCGGCCTC AAGCGCGTCG ACATCACCGA GACCGAACTC GGCGACATCG TGGCCGTCGC CGGCGTCGAA GGCATCACCA TCGGCGAGAC CATTACCGAT GCCGACAATC CCAAGCCGCT GCCGCACATC GCCATCGACG AGCCGACCAT CGCCATGCAG TTCATGGTCA ACACCTCGCC CTTCGCCGGC AAAGACGGCC AGTACGTCAC CTCGCGCAAT TTGCGCGAGC GCCTCGCGAA AGAGCTGCTG ACGAATGTGT CGCTGCGCGT GGAAGATTCC GACTCACCTG ACATCTTTAA GGTCGCGGGC CGCGGCGAAC TGCAGCTTTC GATCCTCATC GAAATGATGC GCCGCGAAGG TTACGAACTC ATGGTCGGCA AGCCCGAGAT CGTCACCAAG CACATTGACG GCAAACTGGT AGAGCCCATC GAGAAGCTCA CCGTCGACAT CCCCGAGACC TTCATCGGCG TGGTCATTGA GAAGATCGGC ACCCGCAAGG GACAGATGGA AAAGATGACC AACCACGGCT ACGGCCGTGT GCGCATGGAG TTCAAAGTGC CCAGCCGCGG ACTCATCGGC CTGCGCAGCG AACTCCTCAC CGACACCCGT GGCACCATCG TGATGAACTC GCTCTTCGCC GGCTACACCG AGTGGCAGGG CGACATCCCG CACCGCCCCA CCGGCGCGCT CGTCGCCGAC CGTAACGGAC TTACCACCGC GTACGCGCTT TTCGGATTGC AGGAACGCGG AGAACTTTTC CTCGGTCCGG GTGTCGACGT TTACGAGGGC ATGGTCATCG GCGAGAACTC ACGCGATAAC GATCTCGACG TAAATTGCGT CCGCGAGAAA AAGCTCACGA ACATGCGCGC GTCGACCTCC GACGATGCCA TCCGCCTCGT CCCCTTCAAG AACTTAAATC TCGAGCAGGC GATCGATTTC ATCGCCGACG ACGAGCTCTG CGAGGTCACC CCGAAGACGC TTCGCCTGCG CAAGAAGATC CTCCAGGCCA ACCGTCGTCC GCGCCGCTAC GCTACGCCGG AAGACTAA
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Protein sequence | MSKALRNIAI IAHVDHGKTT LVDAMLKQSG TFRANEQVAD RVMDSNELER ERGITILAKN TAVFYHDIKI NIVDTPGHSD FGGEVERALK MVDGVMLLVD ASEGPLPQTR YVLGKALEAN LPPIVVINKI DRPDARAQEV LNEIYDLFID LDAKEEQLEF PVLYTNAKIG TASTDAKVAG EDLQPLFEAI VKTIPPPKGK TDGPLQVLVA NLDYSDYLGR IAIARVFNGT LFTGEDVVIA KLDGSFHKTK ITKLFSFSGL KRVDITETEL GDIVAVAGVE GITIGETITD ADNPKPLPHI AIDEPTIAMQ FMVNTSPFAG KDGQYVTSRN LRERLAKELL TNVSLRVEDS DSPDIFKVAG RGELQLSILI EMMRREGYEL MVGKPEIVTK HIDGKLVEPI EKLTVDIPET FIGVVIEKIG TRKGQMEKMT NHGYGRVRME FKVPSRGLIG LRSELLTDTR GTIVMNSLFA GYTEWQGDIP HRPTGALVAD RNGLTTAYAL FGLQERGELF LGPGVDVYEG MVIGENSRDN DLDVNCVREK KLTNMRASTS DDAIRLVPFK NLNLEQAIDF IADDELCEVT PKTLRLRKKI LQANRRPRRY ATPED
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