| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4298 |
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| Symbol | |
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| ID | 4071871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5107490 |
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| End bp | 5108935 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637986331 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_593372 |
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| Protein GI | 94971324 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.15389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACTC GTCTTCCAGT CATCATTCAA GGCGGTATGG GCGCTGGCGT TTCAGGTTGG
CGCCTGGCGC GCGCAGTTTC TTCCAAAGGA CAACTTGGCG TGGTTTCCGG CACAGCCCTG
GATGTGCTCA TGGCACGCCG TCTGCAGGAC GGTGATCAGG GCGGACATGT CCGCTTCGCT
CTGAAGCATT TTCCGTCGCA GGAGATCGCG GCGCGAATCA TTGACCGACA CTTCATCGAA
GGCGGGAAAG CTCCTGATGC GCCATACAAG CCTGTCCCAA TGCATTCGCC GCGACCGAAC
AGTGAGCTCA TTCAGCTGAC GATCGCAGCG AACTTTGTAG AAATCTTCCT CGCGCGACAC
GGACATAAAA ACCCTGTTGG CATCAACTAC CTCGAAAAGC TGCAACTGCC GCACCTTCCT
TCCATTTACG GAGCGATGCT CGCCGGCGTT GAGTACATTC TGATGGGCGC GGGAATCCCG
CTGAAAATCC CCGGCGTGCT CGACGCCTTC GTGAATCATG GAGCAGCGGA GTATCCGCTG
GCCGTCGCAG GTGCACAGGA CGGTGACGAT TTCAAAGCGA CGTTTGATCC TCGCGAGTAT
CTCGACATCG ACTTGCCGCC ACTCACGCGA CCGAAGTTCC TGCCAATTAT TGCTTCCAAC
GTGCTCGCTC TCACGTTGAT GAAGAAGGCG AACGGGCGTG TGGATGGATT CATCGTTGAA
GGTCCCACTG CAGGCGGGCA TAACGCGCCT CCGCGCGGGA AAATGCAATT TGACGCCGAT
GGCGAAGTCA TCTACGGCGA ACGCGATGCT GTTGATCTCG AGAAACTCCG CGCTCTTGGC
CTGCCGTTCT GGCTAGCGGG CGGATACGGT TCGCCAGAGA AGCTGGAAGA AGCATTAGAG
AACGGAGCCA CGGGCGTCCA GGTCGGCACT CCGTTTGCAT TGACCGACGA ATCGGACTTG
GAACCTGTGA GCAAGCGCGA ACTTCTCCGC CAGGTTAGGG AGGGTACCGC GCAGGTGCGC
ACGGACGTCA CCGCTTCGCC TACGGGCTTT CCCTTCAAAG TTGCGCAACT GTCGAATTCA
CAAACCAACA CGGCAATTTA CGAAGCGCGC GAACGCATCT GTGACCTCGG CTTTCTACGC
GAAGGCTATC GCACGCTCAC AGGAACGCTG GACTATCGCT GTGCCGCGGA ACCGGAATAC
GTGTTCCTTG CAAAAGGTGG CGACATAGAA CAGACGAAGG GCCGTAAGTG CCTTTGCAAC
GCGTTGGTAG CGAACATCGG AAAACCACAA CTGCGTGCGG AAGGCCGTCT TGAGCCAACC
CTGATCACCA TGGGCAACGA CCTCGTAGGA ATCGGCAGAT TCCTGCGTCC AGACCACGAA
GGCTATTCGG CGGCTGACGT GATTCAGCAC TTACTAACGG GCGTAGCGGC AGAGGCTATC
GCTTAG
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| Protein sequence | MGTRLPVIIQ GGMGAGVSGW RLARAVSSKG QLGVVSGTAL DVLMARRLQD GDQGGHVRFA
LKHFPSQEIA ARIIDRHFIE GGKAPDAPYK PVPMHSPRPN SELIQLTIAA NFVEIFLARH
GHKNPVGINY LEKLQLPHLP SIYGAMLAGV EYILMGAGIP LKIPGVLDAF VNHGAAEYPL
AVAGAQDGDD FKATFDPREY LDIDLPPLTR PKFLPIIASN VLALTLMKKA NGRVDGFIVE
GPTAGGHNAP PRGKMQFDAD GEVIYGERDA VDLEKLRALG LPFWLAGGYG SPEKLEEALE
NGATGVQVGT PFALTDESDL EPVSKRELLR QVREGTAQVR TDVTASPTGF PFKVAQLSNS
QTNTAIYEAR ERICDLGFLR EGYRTLTGTL DYRCAAEPEY VFLAKGGDIE QTKGRKCLCN
ALVANIGKPQ LRAEGRLEPT LITMGNDLVG IGRFLRPDHE GYSAADVIQH LLTGVAAEAI
A
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