Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4240 |
Symbol | |
ID | 4073167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5027197 |
End bp | 5028888 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637986272 |
Product | nickel-dependent hydrogenase, large subunit |
Protein accession | YP_593314 |
Protein GI | 94971266 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAAC GAATCACCAT CGATCCGATC ACCAGAATTG AAGGCCACCT CCGCGTAGAT GTCCAAGTGG ACAACAACTC GGTCACAAAC GCCTGGGCCT CGTGCACTAT GTGGCGCGGC ATTGAAAACA TCCTCAAGGG CCGTGACCCC CGCGATGCAT GGCTCTTCAC CCAGCGTTTC TGCGGTGTGT GCACCACCGT GCACGCGATG GCCAGCGTCC GCGCGGTAGA GGATGCGTTG AAGCTGGAGA TCCCGCTAAA CGCGCAATAC ATCCGCAACC TCATTCTGAT TGCCCACGCG CTGCACGATC ACATCGTGCA TTTCTACCAG CTCTCGGCTC TCGACTGGGT TGATGTCATG CAGATTCCGA AAGCCGATCC TGCCGCGACT TCAAAGCTCG CCGAGAGCCT TTCGCCATGG TTCCGCAACT CGCGCAACGA ACTCAAGCAG GCGCAGGACC GCGTGAACGC TGTTGCTGCC AGCGGCCAGC TCGGCATCTT CGCCAACGGC TACTGGGGAC ACCCAGCGAT GCGCCTCTCG CCCGAGGTGA ATCTGCTTGC CTTCTCGCAC TACATGCAGG CGCTGGAGTA TCAGCGCAAA GCGCTGCAGA TCGTCGGCAT CCTCGGCTCA AAGACACCGC ACATCCAGAA CCTCACGCCC GGTGGTGTCT CGAACGCGAT TGATCTCGAT AGTCAGTCGG CGCTGAACAT GGAGCGCCTT GAGATGATCC GCGGCCTCTT TGCAGAGGTC TCGCGTTTCA TCAACGAGGT TTACCTCGTG GATGTCTGCG CTGTAGCTTC GATGTACCCC GAGTGGTTCA ATATCGGCAG CGGCGTCACC AATTACCTCG CCGTTCCGGA CTTGCCGCTC GACAGCCGCG GTTCCAGCTA CGATCTTCCG GGCGGCTACA TCGGTGCAGG AGGACTGAAA TCGTTCCAGA CTGCTTCTGA CGACGCCTTC CGCAAAGGCG TGACCGAAGA CGTAACCCAC GCCTACTACT CGGGCGATAA ACCGCTTCAT CCCTGGGAAG GCGAGACTAA CCCGCAGTTC ACCGGCTGGA ACGGTGACGA GAAGTACTCC TGGGTGAAGG CGCCACGCTT CAACGGCGAT CCTGCGCAGG TCGGTCCACT GGCACAGGTG CTGATCGGTT ACACCCAAGG TCACGCGCTC ACCAAGAAGT ATGTCGGCCT AGCTGCGGAG AAGGTTCATG CCGTCAGCGG CATCCAACTG CAACCGGCAA TGCTCCACTC CACTCTCGGC CGCCACGCCG CGCGCGCCAT CCGCGCCGGC ATGCTCGCCG AGTTGGCGCA AAAGCATCTT GACCTGCTCA CCAACAACAT CGCAAAGGGT GACTACTCCG TCTACAACGC ACCGGTCTTC CCCAGCCACG AAGTAGAAGG TGTCGGCACC CACGAAGCTC CGCGCGGTAC GCTCTCGCAC TGGATTGTGA TCAAAGACGA GAAGATCAAG AATTACCAGG CCGTCGTTCC TTCGACCTGG AACGCCAGCC CGCGCGACCA AAAGAACGCG CATGGCCCGT ACGAGGCATC GCTACTGCAC ACGCCGCTAG CGCGCCCGCA AGAGCCACTT GAGGTCTTGC GCACCATTCA CTCGTTCGAT CCGTGCATGG CTTGTGCCTG CCACACCTTC GATCCATCCG GAAACAAGAT CGCAGCGGTC AATATTTTAT GA
|
Protein sequence | MAKRITIDPI TRIEGHLRVD VQVDNNSVTN AWASCTMWRG IENILKGRDP RDAWLFTQRF CGVCTTVHAM ASVRAVEDAL KLEIPLNAQY IRNLILIAHA LHDHIVHFYQ LSALDWVDVM QIPKADPAAT SKLAESLSPW FRNSRNELKQ AQDRVNAVAA SGQLGIFANG YWGHPAMRLS PEVNLLAFSH YMQALEYQRK ALQIVGILGS KTPHIQNLTP GGVSNAIDLD SQSALNMERL EMIRGLFAEV SRFINEVYLV DVCAVASMYP EWFNIGSGVT NYLAVPDLPL DSRGSSYDLP GGYIGAGGLK SFQTASDDAF RKGVTEDVTH AYYSGDKPLH PWEGETNPQF TGWNGDEKYS WVKAPRFNGD PAQVGPLAQV LIGYTQGHAL TKKYVGLAAE KVHAVSGIQL QPAMLHSTLG RHAARAIRAG MLAELAQKHL DLLTNNIAKG DYSVYNAPVF PSHEVEGVGT HEAPRGTLSH WIVIKDEKIK NYQAVVPSTW NASPRDQKNA HGPYEASLLH TPLARPQEPL EVLRTIHSFD PCMACACHTF DPSGNKIAAV NIL
|
| |