Gene Acid345_4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4113 
Symbol 
ID4072304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4869085 
End bp4869753 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID637986144 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_593187 
Protein GI94971139 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.432062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.691963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTTAC CGAATTCCAT CACGCTGTCT CGGATCTTCA GCATCCCGCT GTTGATCTGG 
ATCCTTCTCA CCCCGCGCAT TGGCAGTCTC CACGGAGAGA GGGAGCTCCT CGCTTCCGCG
GTGTTCATCC TGGCTTCCAT TACCGATGGG CTGGATGGTT ATCTCGCGCG CAAGCGGCAG
CAGGTCACCA CCATGGGCAT GCTGCTCGAT CCGTTGGCCG ACAAGCTCAT GGTGACGGCG
GCATTCATCA CGCTGGTGCA GGTGAATCCG CACATCGTCA GCGCTTGGGT TGCCGTGATC
GTGATCGGGC GCGAGTTCCT CGTCAGCGGC TTGCGATCGA TTGCGGCGTC GGAAGGTTTC
ACGATCCAGG CTAGCGATCT GGGCAAGATG AAGATGGTGG TCCAGATCGT GTGCGTAGTG
GCGGCGATCC TGGATGTGCG CTGGTGGGAC GCGGAGTGGG ACTTTGGCTC ATTCCATTTT
GTGCTCGCAA TCGACTTGAT CGCGAAGATG GCAATCTGGT TCATGGTGGC ACTGTCGTTG
ATCTCCGCAG TGGATTATTT TGTGGGCTTC TGGCGGAAGA TTGATCGCAG CTCGGAACGC
CGGCGCCGGC GTTCGTTCGT ACTATCGCGG CGGCGCAAAT CACCCGATGT CGCAGCTACC
CAGCAGTAG
 
Protein sequence
MNLPNSITLS RIFSIPLLIW ILLTPRIGSL HGERELLASA VFILASITDG LDGYLARKRQ 
QVTTMGMLLD PLADKLMVTA AFITLVQVNP HIVSAWVAVI VIGREFLVSG LRSIAASEGF
TIQASDLGKM KMVVQIVCVV AAILDVRWWD AEWDFGSFHF VLAIDLIAKM AIWFMVALSL
ISAVDYFVGF WRKIDRSSER RRRRSFVLSR RRKSPDVAAT QQ