| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4072 |
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| Symbol | |
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| ID | 4072494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4821136 |
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| End bp | 4822530 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637986103 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_593146 |
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| Protein GI | 94971098 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.153495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGCA AACGAATTCT CCTTGCGCTC CTGTTGCTCC TGATGGCCGG CTGCAAAGTC
GGACCGAACT ACAAACGCCC CGCCGTGACG GTTCCGGATG CTTACCGGGG GCCGACCTTG
GACGGCGGAC AAGCCAACGG CATCTCCCTG GGCGAGCAGA AGTGGTGGGA TGTCTTCAAC
GATGAGCAAC TGCAAAAGCT GATCCGACAA GCTCTCGATG CTAACTATGA TGTAAAGATC
GCCGCGACTC GCGTGCTCCA GGCACAGGCC GCGCTTGGGA TCACACGCGC CGATCAGTTC
CCCACGATTG CTGGGGGCGC ATCGGCCCTT AACGAGCGTA TCCCGCGGGT GAAAGGCTTG
CCGGCTTACG AAAACAGCGC GCTCCAGGTA AACCTCTCCC TCGTCTGGCA GCTCGACTTC
TGGGGTAAAT ATCGTCGCGC CACAGAAGCA GCGCGTGCAG ACTTGCTCTC CACCGAGTGG
GGCAAGCGCG CCGTCATCAA CAGCGTCATC AGCAACGTCG CCAACGGGTA CTTCCAGTTG
CTTGAGCTCG ATCGCGAGAT GGAGATCGCC AAGGGCACAT TAGCATCGCG CCAAGAATCG
TTGCGCTTGG TGAACATCCG TCAAAAGGGC GGAACGACTT CCCTGCTCGA CGTACGTCAG
TCGGAACAAC TTCTCTACAC GGCCGCCGCT GCCATTCCCG ACCTCGAACG CCGGATCGAG
CAAGAGGAGA ACTTCATCAG CATCCTCCTC GGCCAGAATC CCGGTCCGAT TCAACGGGGC
AAGCCGCTCG TCGAATTCGC GATTCTTCCT TCGGTTCCGC CCGGATTGCC CTCGACTTTG
CTTGAGCGGC GCCCGGACTT GCAGTCGGCG GAGCAGCAAC TGGTCGCAGC GAATGCGCGT
ATTGGTGTCG CGAAAGCTGA CTACTTTCCA CAGATCTCTC TTACCGCCCT CGGTGGATAC
CAGAGCTCGG CGCTAACGGG GCTCTTTTCC GGCCCTGCCG GTTTGTGGAG CTTCGGCGGT
CAACTGGCCC AACCGATCTT CACCGGCGGC AAAATTAGAT CGAACGTGAG ATTAACGGAA
GCTCAGCAAC AAGAAGCGGT GTTCCGCTAT CAACAGTCCA TTCAGCAAGC GTTCCGTGAA
GTCTCGGATT CGCTGGTGGC CTATCGCAAG AACCAGGAGT TCCGCGAACA GGAAGCAAAC
TTGGCGGCTT CTGCCGTGGA TGCTACCCGC CTCGCGCGCA TTCGCTACGA AGGCGGTGTA
TCCAGCTATC TCGAGGTTCT CGATAACGAC ACTCGCTCGT TCGACGCTGA GATCTCGCTT
GCCCAGGCAC AACTCGGCGA ACGCGTCGCA TTGGTCCAGC TCTACAACGC ACTCGGCGGC
GGCTGGCAGC AGTAA
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| Protein sequence | MNCKRILLAL LLLLMAGCKV GPNYKRPAVT VPDAYRGPTL DGGQANGISL GEQKWWDVFN
DEQLQKLIRQ ALDANYDVKI AATRVLQAQA ALGITRADQF PTIAGGASAL NERIPRVKGL
PAYENSALQV NLSLVWQLDF WGKYRRATEA ARADLLSTEW GKRAVINSVI SNVANGYFQL
LELDREMEIA KGTLASRQES LRLVNIRQKG GTTSLLDVRQ SEQLLYTAAA AIPDLERRIE
QEENFISILL GQNPGPIQRG KPLVEFAILP SVPPGLPSTL LERRPDLQSA EQQLVAANAR
IGVAKADYFP QISLTALGGY QSSALTGLFS GPAGLWSFGG QLAQPIFTGG KIRSNVRLTE
AQQQEAVFRY QQSIQQAFRE VSDSLVAYRK NQEFREQEAN LAASAVDATR LARIRYEGGV
SSYLEVLDND TRSFDAEISL AQAQLGERVA LVQLYNALGG GWQQ
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