| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4064 |
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| Symbol | |
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| ID | 4072486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4809365 |
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| End bp | 4810006 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637986095 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_593138 |
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| Protein GI | 94971090 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.368666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0789055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCTC GCGCACGCAT CATCATTGCC GATGACCACA CGCTCGTCGC GGAAGCATGT
AAGAAGTTGC TTGAAGGCGA CTACGACGTG GTGGCAGTGG TGCGTGATGG CAGGGCGCTC
GTGCACTCTG CGTCACAACT GCAACCGAAC GTTGTCGTCA TCGACATCAA CATGCCGCTC
TTGAACGGGT TGGACGCCGG CCAGCAAATT AAGAAAGCAT CTCCCGCCGT GCAACTGGTG
TTTCTCACGA TGAGCGAGGA ACCCGAACTC GTGAAGGAAG CGTTTCGCTG TGGTGCATCC
GCGTACGTCG TAAAGACGGG TGCGGCTGCT GAACTGGTCA CCGCTGTCCA GGAAGTTCTT
TCCGGACACA CCTACCTCTC CCCATCGCTG GCGCGCGAGA GCGCAGCTTC ACCCACTCGT
CCCGGATTTG GGATCGATTC CGATGTACCG CTCACCGAGC GTCAGCGCGA GGTTTTGCAA
CTCCTGGCGG AAGGCCGGTC GATGAAGGAA GTCGGGGCCA TTTTAAAGCT CACGACACGC
ACCGTCGCCT TTCATAAATA CCGTATTATG AAGGCGGTAC ATGCCCGCAA CAACGCCGAG
CTGGTGCGCT ACGCGATCAA GAAGCACATT CTTCCCGCTT AG
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| Protein sequence | MPPRARIIIA DDHTLVAEAC KKLLEGDYDV VAVVRDGRAL VHSASQLQPN VVVIDINMPL
LNGLDAGQQI KKASPAVQLV FLTMSEEPEL VKEAFRCGAS AYVVKTGAAA ELVTAVQEVL
SGHTYLSPSL ARESAASPTR PGFGIDSDVP LTERQREVLQ LLAEGRSMKE VGAILKLTTR
TVAFHKYRIM KAVHARNNAE LVRYAIKKHI LPA
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