| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4037 |
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| Symbol | |
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| ID | 4071176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4772004 |
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| End bp | 4772705 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637986067 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_593111 |
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| Protein GI | 94971063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGT GGCTTGCAGC AGCAACGATG TTTTTCGGCG CGACGGCCTT CGCCTCCGCT
GCCGAACTCG CCGTGCTGCA AAACGGATTC ACCATCCGCC ACGAACGCCA CGAAGTGGTA
GGCGAAACCA CGCGCCTCTA CACCGGCGCG AACGCCGAAG ACTTCATCGA AGTCCCCACC
GCCCAAATCG CTTCTTACGC ACCCGACGAT ACTCCCGCAG TCGCCGGGCC AGAAGCTCCG
AAGGTCATCG ATCTCCACGC CGTCATCAAA GATGCCGGCA TCCGTCACGG CCTCGATCCT
GACTTTATCG CCAGCGTCGT GCACGCTGAG AGCGGCTACA ACGTGAAGGC CGTCTCGCCC
AAAGGCGCGC AAGGCCTCAT GCAGTTGATG CCCAAAACCG CCGCCGGTCT CGGCGTGAGA
GACAGCTTCG ATCCCGAAGC CAACATCGAA GCCGGCACCA AATATCTCCG CGCGTTGCTC
GACCAGTACA ACGGCGACGT CATCAAAGCT CTCGCCGCTT ACAACGCTGG CGTGCAGCGA
GTCGCGCAAT ACCACGGCCT GCCGCCCTTC CACGAGACGC AAGCCTATGT CCGCCGCATC
GTCGTGGAAT ACAACCGCAA GAAAGCCGAA CAGCGCAAAG TGGCCGCCAA AACCCAAGCC
CTCGCGAAGA AACCCGCCGT CGCCACCGCC TCATCCCAGT AG
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| Protein sequence | MRKWLAAATM FFGATAFASA AELAVLQNGF TIRHERHEVV GETTRLYTGA NAEDFIEVPT
AQIASYAPDD TPAVAGPEAP KVIDLHAVIK DAGIRHGLDP DFIASVVHAE SGYNVKAVSP
KGAQGLMQLM PKTAAGLGVR DSFDPEANIE AGTKYLRALL DQYNGDVIKA LAAYNAGVQR
VAQYHGLPPF HETQAYVRRI VVEYNRKKAE QRKVAAKTQA LAKKPAVATA SSQ
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