Gene Acid345_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4024 
Symbol 
ID4071161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand- 
Start bp4757619 
End bp4758242 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content56% 
IMG OID637986052 
ProductTetR family transcriptional regulator 
Protein accessionYP_593098 
Protein GI94971050 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.563014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATCC AGGAACGGCG CGAACGCGAA CGGCTCGAAA CTCGGGAAAA AATCATGGAC 
GCTGCGCGCG AGCTGTTTAT TGAAGAGGGG TACGAAGGGG TTTCCATGCG CAAGGTCGCG 
CAGAAGATCG AATATTCGCC GACCGCGATC TACGTCCATT TCCCCGACAA AGAGCAACTT 
TTCCTCGAAC TCTGTCACTC CGATTTCCGA CGTCTCGCGG CGCAATTCCT CAAGCTGGCT 
GAAATCAAAG ACCCGGTCGA GCGCTTGCGC CGCATCGGTT ATGCCTACGC CGACTTTGGG 
ACGAAGAACC CGAACCACTA CCGAATGATG TTTATGACCG CACATCCGCC GGTCCCGGAC 
GACATGGAAG GCAGGGGCAA TCCAGAGGAA GACGCGTATG CGTTTCTACG CGAAACCGTA 
AAGGAAGCAG TGGCCGCAGG CGCGTTTCGT TCTGATCTCA CTGATGCCGA TTTGATTTCG 
CAGACGGTCT GGGCTGGGGT GCACGGCGTG GTCTCGCTGC AAATCGCAAA GTGCGACGAT 
CCCTGGGTGC CGTGGCGATC ACTGAAGAAA CGTACCGAAC TTGTAGTTGA AGGGTTGTTG 
TCCGGGTTGT TGAAGAAGGG GTAA
 
Protein sequence
MGIQERRERE RLETREKIMD AARELFIEEG YEGVSMRKVA QKIEYSPTAI YVHFPDKEQL 
FLELCHSDFR RLAAQFLKLA EIKDPVERLR RIGYAYADFG TKNPNHYRMM FMTAHPPVPD 
DMEGRGNPEE DAYAFLRETV KEAVAAGAFR SDLTDADLIS QTVWAGVHGV VSLQIAKCDD 
PWVPWRSLKK RTELVVEGLL SGLLKKG