Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4021 |
Symbol | |
ID | 4071158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4754579 |
End bp | 4755616 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637986049 |
Product | secretion protein HlyD |
Protein accession | YP_593095 |
Protein GI | 94971047 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.127081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA GAATATTTAC GATCGGCGCT GCAATCCTCG TTACCGCGTC CACCGCTACC GTCATTTGGG GCCACTCGGC GCGCCAAGCC CGCGAGAGCG TGGTTCAGAA GAACACCGCG GATTGGATCG TTGCCGGCGC CGGCCGCGTC GAGCCCGAGT CAGAAGACAT TAAGCTCGGA GCCGAGTTGA GCGGAAAGCT CAAATCGGTC TACGTGGAAG AAGGCGATCG CGTGAAGCAA GGCCAACTCC TTGCTGAATT GGAGAACGCG GACTATCACG CGCAGGTTGC GTCCGCGCAG GCCGAGGTGC ACGAGACGGA AGCGCAGCTT CGCAAAGTGG TGAACGGCGC TCGGCGCGAA GAGCGGCGTG AGGCGCTCTC CACCGTCGAG CAGGCGCGCG CGGTGATGAA CAACTCCGAA AGCGAAATGC TGCGTCGCCA GAAGCTCTAT GAAGCGGGAG TCATCTCGCG CGAAGAAGCC GAGCAGTATG CGAAGGAATA CGACGTCGCC AAAGCGAAAT TCCAGGAAGT CTCCGAGCAC CACAAGCTGG TAGACGAAAC CGCTCGCGAA GAAGATCGCG ACATCGCGAC GGCCAACTTG CTTGCGGCGC GAGCACGGCT GGAGCAGGCG CAAGCGATGT TGGCGAAGAC GTTCGTTCGC TCTCCCATCG AAGGCACGGT GCTGCGTAAA CATCATCGTC TCGGTGAAAG CGTTTCTAAC GGTTCGACGG TCCCGGATCC CATCGTGACG ATTGGAGCAA CAGAACGGCT GCGCGTCCGC GTTGATGTGG ACGAGGCCGA TGTCAGCAAG CTTACGGTCG GGCAGAAAGC GTATGTGACC GCCGATGCGT ATGGCGATAA ACGCTTCCGG GGGCACATCG TGCGCATTGG CCAGGAGCTC GGACGCAAGA ACGTTCGCAC CGATGAGCCC ACCGAGCGGG TAGACATGAA GATCCTCGAG ACCATGATCG AACTCGATGG CGGAGACGAA TTGCCAATCG GACTGCGCGT GAATACGTTT ATCGTTCCGA AGAGCTAG
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Protein sequence | MKKRIFTIGA AILVTASTAT VIWGHSARQA RESVVQKNTA DWIVAGAGRV EPESEDIKLG AELSGKLKSV YVEEGDRVKQ GQLLAELENA DYHAQVASAQ AEVHETEAQL RKVVNGARRE ERREALSTVE QARAVMNNSE SEMLRRQKLY EAGVISREEA EQYAKEYDVA KAKFQEVSEH HKLVDETARE EDRDIATANL LAARARLEQA QAMLAKTFVR SPIEGTVLRK HHRLGESVSN GSTVPDPIVT IGATERLRVR VDVDEADVSK LTVGQKAYVT ADAYGDKRFR GHIVRIGQEL GRKNVRTDEP TERVDMKILE TMIELDGGDE LPIGLRVNTF IVPKS
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