| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4008 |
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| Symbol | |
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| ID | 4071144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4734355 |
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| End bp | 4736106 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986035 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_593082 |
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| Protein GI | 94971034 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.370784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAT CGGCAAGAAA TATCGCCCTA GTTTTCCTGC TGCTGCTGAT TCTTGCGGCG
GTCGTTGGCT ACTTCCAGAC CTCCCCGACC GACGCCCTGG CGCCGAAGAA GCCGGGTCGC
GTCCCTGATC AGCCCCAGAT TGTGGACCAG AGCCCATTGC AGGCGGCCCG CGTCTGCGCA
CGTACCGCGA CCACCTCAGA CGAAGTGGAT TACGCCACGG AATCGATACG CCTCGCGGAC
CGTTCTGTTG ACCTGGCGTT CTCGATGGCG CTGCGCGATG CCGACCTTAA TCCGCCACCG
GAGAGCCCCG AAGTCAAGAA GATCGACGCC CGCATTACCA AGCTCGACGC CCAGCTCGCG
ACCGACAAGG AGATCGTAAA GGGCTTCAGC GACATGCTGG CGAAGCCCGA CAATGGCGCC
GACCAGGACG AAATCGCCGA GCAGGTCGAA ACCGCAAAAG CCCAGCAAGC GGTCACGGAG
GATGAACTCG ACGAAGCCAA GCAGGCGCTG CTACGTGCCG GCGGCGATCG CCAGACCCGT
ATTCAACAAA TGCGCGACGA GTACCAAGCC GTGCAACAGG ACAATGCGGG CGTACCCGAC
GCAGCGAAGA ACGCTTCCTT CTCCGTGCCG GGGAACCTTA TCGGTCAAGT TTCGAGTTGG
CGGAGCCTAC AGGACCGCCT GACGAAGCTT CGGGAGGCCC AGGACCGTGC TCTCGGACGG
GTCCAGGACC TCACTCGCAA ACACGATCAG CTTCAGCAGC AGATTTCACA AGCACCAACC
TCTCTTGGTT CCCACACGGA AGCTCTGGCC ACGTTGAAAC GGCAGGCAAT CGAGCGCCAG
ATGCTCGCCG ACTACAACAA GCGTATCGAG GCCGAACAAA AGCTCGCGCA GGAGTTCGGC
GACTGGGGCG GCCTGATTCT GAGTTACCGG CAGCGCGCGA CGCATGCGCT GGTACTTTCG
CTGATTTGGA TCCTGCTGAT TGTGTTGGCT GTCGTCTTTG CCGAAGGGCT GGTGACGCAC
TTCTATCACG AGTCAGACCG TCGCAAGGCC GGCACCATGC AGATGGCGCT GCGCTTCACC
CTGCAAGTGG GCGGAGCGCT GCTGATACTG CTTGTGATCT TCGGGCCACC GAGCCAGCTT
TCGACCGTGA TTGCCCTCGC CGGCGCCGGG CTGACTGTAG TGATGAAGGA CTTTATCGTC
GCCTTCTTCG GATGGTTCGT GCTGATGGGG CGCAACGGTA TTCGCGTCGG CGATTGGGTG
GAGATTAACG GCATCGGCGG CGAAGTTGTG GAGATCGGTA TTCTTCGCAC CGTCATTCTT
GAAACCGGCA ACTGGAGCGA TCCGGGCCAT CCGACGGGAC GAAAAGTCGC CTTCGTGAAC
AGCTTCGCCA TCGAAGGCCA TTACTTCAAC TTCTCCACCA CCGGCCAGTG GCTGTGGGAC
GAGATGCAAT TGCTGGTGCC TGCGGATAAA GACCCGTACC GGGTCTCGGA AGATGTTCGC
AACATCGTCT CGGAAGCAAC CGCTCCTGAC GTGGCCATGG CGCAACAGGA GTGGGAACGC
GCCACTCGCG GCGCTGGCGG CCTAAAGGCA TTTTCAGCGG CGCCTGCAAT CGATATCCGC
TCCACCGGTT CCGGCGTGAG CATCGTAATC CGCTACATCA CTCGCGCCAA CGTCCGTTAT
GAACTGAGAA CAAAACTCAA CCACGCCATC GTGGAGTTGT TCCACGGTCA CGCTGAGGTG
ACGAAACCGT GA
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| Protein sequence | MLKSARNIAL VFLLLLILAA VVGYFQTSPT DALAPKKPGR VPDQPQIVDQ SPLQAARVCA
RTATTSDEVD YATESIRLAD RSVDLAFSMA LRDADLNPPP ESPEVKKIDA RITKLDAQLA
TDKEIVKGFS DMLAKPDNGA DQDEIAEQVE TAKAQQAVTE DELDEAKQAL LRAGGDRQTR
IQQMRDEYQA VQQDNAGVPD AAKNASFSVP GNLIGQVSSW RSLQDRLTKL REAQDRALGR
VQDLTRKHDQ LQQQISQAPT SLGSHTEALA TLKRQAIERQ MLADYNKRIE AEQKLAQEFG
DWGGLILSYR QRATHALVLS LIWILLIVLA VVFAEGLVTH FYHESDRRKA GTMQMALRFT
LQVGGALLIL LVIFGPPSQL STVIALAGAG LTVVMKDFIV AFFGWFVLMG RNGIRVGDWV
EINGIGGEVV EIGILRTVIL ETGNWSDPGH PTGRKVAFVN SFAIEGHYFN FSTTGQWLWD
EMQLLVPADK DPYRVSEDVR NIVSEATAPD VAMAQQEWER ATRGAGGLKA FSAAPAIDIR
STGSGVSIVI RYITRANVRY ELRTKLNHAI VELFHGHAEV TKP
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