| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4003 |
|---|
| Symbol | |
|---|
| ID | 4071139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4729802 |
|---|
| End bp | 4731487 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637986030 |
|---|
| Product | peptidase S10, serine carboxypeptidase |
|---|
| Protein accession | YP_593077 |
|---|
| Protein GI | 94971029 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.927019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAT CCTGGCTGAA CGCCCTACTG TGCTGCGCGA TTTTGGGCGC AACCGCAGGG
GCACAGCAGA AGAATCCTCC GAAACCTCAA GTTGAAAAGA GTTCGCCCAG CGAAAACATC
GCAAACCGAC CGGCGAACGC GCCGGAAGAA CCGCGCGCTC AGCGCGAAGA ACGACGGCAG
GAAGACGCTC CGCAACAACC ACGCGGTGAG GGGCAGAAGC CGTCGATGAA GTGGGACATG
ACGGAGACAG CTCCGGTGGT GACCCACCAC GAAATCAACG TAAACGGCCG GGCTCTGCGA
TACACCGCCA CGGTCGGACG GTTGCCGATT AAAGACCTCA CTGGCACCAC CGAAGCGCTG
ATGTTCTACG TCGCTTACAC GCTCGATGGA CAGGATGCGA CGAAGCGTCC AGTCACGTTT
GCGTTTAATG GCGGTCCGGG ATCGGCGTCG ATTTGGCTGC ACATGGGAGC GCTCGGCCCG
CGCCGCGTCG CGCTGCAGCA GGACGGCATG ATGCCGCCGT CGCCGTATCA CCTCATCGAC
AACCCCGGCA CGCCGCTCGA AAAGACCGAC CTGGTATTGA TTGACGCCAT CGGCACCGGC
TTCAGCCGCC CCGCGGACCT GGAAAAGGGC AAGAAGTTCT GGAGCGTGAA GGGCGACATC
GAAGCGTTTG GCGAATTCAT TCGCCTCTAC ATCACGCGGA ATGAACGTTG GGCTTCGCCG
CTCTACATCT TCGGCGAAAG CTATGGAACC ACGCGCGCAG CGGGAATTTC GGGCTATTTA
GTGGATCGCG GCATTGCCTT CAACGGCATT TGCTTGCTCT CGGAAGTGCT GAACTTCGAG
ACGTTGGAAT TCAGCAAGAG CAACGACCTT GGCTATCAGC TCACGCTGCC GTCGTACACC
ATGATCGCCG GATACCACAA GATGCTCGCC CCGGAGCTTC TCCAGAACAT GGAGAAGACG
AAGTCTGAGG TGGAGCAGTT TGCGAATGGT GAATACGCGC AGGCGCTGCA AGCGGGCGAC
AGTCTCACTG CCGACCAGCG GGCGCACATC GTTGAGCAGC TCGCGAAATA CACGGGACTC
AAGAAGGACT TCATCGAGCA GTCGAACATG CGGATCGATG TCCGCGGCTT CACGCATAAT
TTGCTCATCG ACCAAAAGCT GCGCGTCGGA CGCCTCGACG GCCGCTATAC CGGACCGGAT
CCAAACGGCC TGATGGATAC GCCGTTCTAC GATCCGACGG GCTCGGCAAC CGATCCACCG
TTCACCGCGA CGTTTAACAA CTATCTGCGG AATGACCTGG GCTACAAAAC CGACATGCCT
TACTACGTAT CGGCACGCGA CATGGCGGGC GCAACCGAGC CCGGGCAGCG CGGTGGTGGA
CCGTTCCAGT GGGAGTGGGG ATCCGCAATT GAAGGCTATC CCGACACTGC GACCGCATTA
CGTGCAGCGA TGGTGAAGGA CCCGTACTTG AAGGTGTTGG TGATGGAGGG CGATTACGAC
CTCGCCACGC CGTATTTCGC GGCGAACTAC ACCATGAATC ATCTCGACCT GACGCAGCAG
TACCGCAAGA ATATTTCGTA CGCGCGGTAT GCGGCGGGTC ACATGGTTTA TCTGCCGATG
GATGGGCTTG CGAAGATGAA GAAGGACTAC GACTCGTTCC TCGATCAAAC CGCGAACCGT
CAGTAA
|
|---|
| Protein sequence | MKQSWLNALL CCAILGATAG AQQKNPPKPQ VEKSSPSENI ANRPANAPEE PRAQREERRQ
EDAPQQPRGE GQKPSMKWDM TETAPVVTHH EINVNGRALR YTATVGRLPI KDLTGTTEAL
MFYVAYTLDG QDATKRPVTF AFNGGPGSAS IWLHMGALGP RRVALQQDGM MPPSPYHLID
NPGTPLEKTD LVLIDAIGTG FSRPADLEKG KKFWSVKGDI EAFGEFIRLY ITRNERWASP
LYIFGESYGT TRAAGISGYL VDRGIAFNGI CLLSEVLNFE TLEFSKSNDL GYQLTLPSYT
MIAGYHKMLA PELLQNMEKT KSEVEQFANG EYAQALQAGD SLTADQRAHI VEQLAKYTGL
KKDFIEQSNM RIDVRGFTHN LLIDQKLRVG RLDGRYTGPD PNGLMDTPFY DPTGSATDPP
FTATFNNYLR NDLGYKTDMP YYVSARDMAG ATEPGQRGGG PFQWEWGSAI EGYPDTATAL
RAAMVKDPYL KVLVMEGDYD LATPYFAANY TMNHLDLTQQ YRKNISYARY AAGHMVYLPM
DGLAKMKKDY DSFLDQTANR Q
|
|---|
| |