Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3986 |
Symbol | |
ID | 4072459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4716467 |
End bp | 4717681 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637986013 |
Product | serine phosphatase |
Protein accession | YP_593060 |
Protein GI | 94971012 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.613472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGTG AACCCATCGA GTGTGCGGTA AGATACCGGG ACACGTGGGG AGGATCGGCC ATCAAGCTTT TTGCGAAGTG GAATACCGGA TCGACGAAGC GGGCATCGTT CTGGCAGAGC CTGACGGGAC CGTCGCGCTT GATCTTCTTC GCGGCGGTGT TTTTTACGTT TTCCTGCCTG GGCTTCCTTA ATGTGATGAC CACTCCGCTG CGGCAGCCCG CATGGCAGAT TGTGGCGATG GTGCTCGGCA GCGCCATTTT TGCGATCTTC TACGCGTGGG CGGGCGTGCT GCGACGGTGG TGGTGGATGA TCGTTGTCGC CCTGTCACAA GTGGCGTACT TTACGGTGGT CGTTAGATTC GGAGGGCAGC GCGCCTTGCT GCTCGACCCG CATTCCGAGA CCCAGGTCCA GCTCTTTTGG ATGAGCCTGC TCGGCAAAAT AACGTTGATT GCCGGCTACA CCTTCTTCCT CATCTTCTTC GGGCGCGAAG GCGTTCGCTA CTTCCAGGCG CATGCGGAAA TCAAGCTGGC GCAGGAGATC CACCAGCGGC TGGTACCGAC CATCGAGCGG CAAATCGGAC GCTTCTCTCT GTACGGAAAC TCGGTGCCAA GCGGCGAGGT GGGCGGCGAC CTGGTGGACC TGGTAGAAGG CGGGAGTTGG ACGGCCTACG TTGCCGATGT CTCCGGGCAT GGCGTGTCAG CGGGCGTGCT GATGGCAATG TTTAAGACAG CGGTCAGAAC CACCGTGGTT GCCGATAGCC AGTCAAACCT GATGCTCGAT GCAGTGCACC GTGCTTTATA TCCGTTGAAG ACGCCGAACC TGTTCGTCAC CGCCGGCGTG TTGCACTGTG ATTCCGCGGG CGCTTTTAGT TTGTCGCTCG CAGGACATCC TCCGCTGCTG CATTACAGAA AATCAACGAG TGACGTTGTA GAGCATCCCG CCATGGATCT TCCGCTGGGA ATCCTGCCGG AGCAGAGTTT TCAGAGCACG CGCATCACGA TGGAGAGCGG CGACCTGCTG GTGTTGCTGA CCGACGGCTT CACGGAAGTC TTCGACGACA AGAAGAACGA GATGGGTATC GAACCGGTGA AGGCCACCGT GCAATCGAAC GCAGCACGCC CTTTACCGGA AGTATTCGCC GCGGTGCGCA AGATCGCGCT CGCCTTCGGC AAACAGGAAG ACGACCAGAC CCTGCTGCTT ATCCGAGCTA ACTGA
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Protein sequence | MTREPIECAV RYRDTWGGSA IKLFAKWNTG STKRASFWQS LTGPSRLIFF AAVFFTFSCL GFLNVMTTPL RQPAWQIVAM VLGSAIFAIF YAWAGVLRRW WWMIVVALSQ VAYFTVVVRF GGQRALLLDP HSETQVQLFW MSLLGKITLI AGYTFFLIFF GREGVRYFQA HAEIKLAQEI HQRLVPTIER QIGRFSLYGN SVPSGEVGGD LVDLVEGGSW TAYVADVSGH GVSAGVLMAM FKTAVRTTVV ADSQSNLMLD AVHRALYPLK TPNLFVTAGV LHCDSAGAFS LSLAGHPPLL HYRKSTSDVV EHPAMDLPLG ILPEQSFQST RITMESGDLL VLLTDGFTEV FDDKKNEMGI EPVKATVQSN AARPLPEVFA AVRKIALAFG KQEDDQTLLL IRAN
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