Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3966 |
Symbol | |
ID | 4072439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4693119 |
End bp | 4693625 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637985993 |
Product | hypothetical protein |
Protein accession | YP_593040 |
Protein GI | 94970992 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.359315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.361845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGTGGA AGCCCAACGC CACCCCCGGT AGCACTGCAA CTCCCGAGCC CATCCGGCCC ACGCCGACGC CTGCCCCGAG CGCCGGCCCG GTCATCGAAC CCACGCCCGC TCCCGCCCCG CGTAACGCCG CGGTGAACAC CGCCGAGCAG GCCACCATCG GCAAGTCGCT CGTCATCAAG GGCGAGGTCA CCGGCTCCGA ATCTCTCTAC ATTGACGGCC GCGTCGAAGG CTCCATCAAC CTTCCCGGTA ACCGCGTTAC GGTTGGCCGC AACGGCATCG TTTCCGCCAA CATTAATGCC CGCGAAGTCG TCGTCCTCGG CAAGGTGAAG GGGAACCTCA CCACCAGCGA TCGCGTCGAC ATTCGCAACG AAGGCTCGTT GACCGGTGAC GTCGTCGCCC AGCGCATCAG CATTGAAGAC GGCGCGTTCT TTAAGGGCGG CATCGACATC CGCAAGCCCG GCCAGAAAGA CGCTGATAAG GAAACCGCCA CCGCGAAGAC CGCGTAA
|
Protein sequence | MMWKPNATPG STATPEPIRP TPTPAPSAGP VIEPTPAPAP RNAAVNTAEQ ATIGKSLVIK GEVTGSESLY IDGRVEGSIN LPGNRVTVGR NGIVSANINA REVVVLGKVK GNLTTSDRVD IRNEGSLTGD VVAQRISIED GAFFKGGIDI RKPGQKDADK ETATAKTA
|
| |