Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3936 |
Symbol | |
ID | 4071319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4654159 |
End bp | 4656399 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985962 |
Product | TPR repeat-containing serine/threonin protein kinase |
Protein accession | YP_593010 |
Protein GI | 94970962 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [S] Function unknown [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase [COG5616] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACA TCATCGGACA GACGCTCTCT CACTACGTTG TATCCCGCAA GCTCGGCAGC GGTGGGATGG GTGTGGTTTA CCAAGCCGAG GACACGACTC TCGGCCGCCA CGTTGCGCTC AAATTTCTGC CCGATTCCCT CGCGCAGGAC AGCCACGCAC TTGAACGTTT CCAGCGCGAA GCACGCGCGT CTTCCGCGCT CAATCACCCG AACATCTGCA CCGTGTACGC CATCGAGCAG CATGAGCGCC AGCACTTCAT CGTGATGGAA CTGCTAGAAG GCCAATCGCT CGCCGCGATG ATCGGCAAGA GTGCTTTCGA AATCGAACAA CTGCTTGCAC TCGCCATTCA AATTGCCGAC GCCCTCGAAT CGGCTCATGC CAAGGGCATC GTGCATCGCG ATATCAAGCC CGCAAACATC TTCGTCACCC CGCGTGGTCA GGTGAAGATC CTCGACTTCG GTCTCGCCAA GATGGAGCTG CTCAAACCTT CCGTCGGTGT GGCCACAGTC TCTCAGATGG AAACTGTCGG ACAGCGCGAT GACCTCACCA TCCCTGGCAC CGCTCTCGGA ACTGTCGCCT ACATGTCTCC AGAGCAAGCC CGCGGCCAGT TCACTGATTC GCGCACCGAT CTCTTCTCGC TCGGCACCGT GCTCTATCAA ATGGGTACAG GAGTGCTGCC CTTCCAGGGC GACACAACCG CAGTGGTCTA TGAAGCGATC CTCAATCGTG ATCCCGTGCC AGTTGCCGAG GTCAACGGCG CATTGCCGCA AGCTTTCGCC CGCATCGTGG AGAAGGCGTT AGAGAAAGAC CGCACGCTGC GCTATCAGAC CGCGAATGAC ATCAAGACCG ATCTCACTCG CCTTAAACGC GATCTCGACT CCCGCGAACG CCGTGCCTCC AGCCAGAGTG AGTCGCGCAC TGCTGCCGCG AAGCCCGCAG CGAAATCGGT CGCCGTGCTG TACTTCGAAA ATCTCTCAGG TTCGAAGGAA GACGAATACT TCCGCGACGG CATCACCGAA GACATCATCA CCGAACTCTC TAAGATCAAA GGCCTGAATA TTTTCTCGCG CCCCACGGTG CTCGCCTATC GCGACAAACA GGTCACGCCC GCGCACATCG GCCAGCAGCT CCGCGCGGCG TATGTCCTCG CCGGCAGCCT TCGCCGCTCC GGCAATCGTC TTCGCATCAC GACCCAACTC GTAGATACCA CCACCGACTT TCCCATCTGG TCGGAGCGTT ACGATCGCGA GATGAAAGAC GTCTTTGAAG TCCAGGACGA GATCGCCGGT AAAATCGCGC AGGCCTTGCG TGTGACGCTT TCGCCGCAGG AGCAACAAGA GATCGCCGCC AAGCCCACCG ACAATCTCCA GGCCTACGAC CTCTACCTAC GCGGCAAGAG CTACGCCCGC CGTCTCCAAC GCCAGGACCT CGAGTTCGCC CTGCAGATGT TCGAGAACGC CGTCATTCTC GATCCCAACT TCGCGCTCGC CTTCGCTGCG ATCGCCAACG TCTGCGCGCA GAACCACTAC AACTACGGCC GCGATCCGGA ATGGATGCAG CGCGCCATGC ATGCCTCTGA AACCGCCGTT GTATTACGTC CCGATCTCCC GGAAGTACAA GTCGGCCAGG CGTGGATTCT CTACGCCAAC AACAAGTACG ACGAAGCCAC CGCCGTCATC CAGCGCGCCA TCGAGCGCAA GCGAGATTGC GAAGGCGCGT ACTACATTCT CTTCCGAACA CTCTTTTCGG CCGGCCGCTA TCAGGAAGTT GCCAATCTCG CGGAAGCCGC GGTCGAGGCC AGCGGCGACG ACTACAACAT CTATGTTCCG ATCATGAATT CGCTCGGCGC ATTGGGGAAA ACCGAAGCGC TCCGCAACTT CCGCCAGCGC GACATCTCCG CCCTCGAGCG CCATCTCAAG CAGGTTCCCG AAGACGCTCG CGCCCGTATC CTGCTCGCCA CCGACTACGC CACCGAAGGC CGCATGGAAG AAGCTGCCCG CGAGACCAGC CTTGCTATGA CCTTGCGCCC CAACGAGGCC ACCGTCCTCT ACAACGCCGC CTGCGTCTTC TGCACTATGA ACAAAAAATC GGAAGCCATG GACGCGCTCG CCAAAGCCTG GCACGCCGGC TTCAAAGACC CAGCATGGGT GCGCCGCGAT CCCGACCTCG AACTGCTCCA TGGCGATCCC GAGTTCGAGC GCCTGTATCC ACCCAACGCT ACCGGCGCCA TCGCCAACTA A
|
Protein sequence | MENIIGQTLS HYVVSRKLGS GGMGVVYQAE DTTLGRHVAL KFLPDSLAQD SHALERFQRE ARASSALNHP NICTVYAIEQ HERQHFIVME LLEGQSLAAM IGKSAFEIEQ LLALAIQIAD ALESAHAKGI VHRDIKPANI FVTPRGQVKI LDFGLAKMEL LKPSVGVATV SQMETVGQRD DLTIPGTALG TVAYMSPEQA RGQFTDSRTD LFSLGTVLYQ MGTGVLPFQG DTTAVVYEAI LNRDPVPVAE VNGALPQAFA RIVEKALEKD RTLRYQTAND IKTDLTRLKR DLDSRERRAS SQSESRTAAA KPAAKSVAVL YFENLSGSKE DEYFRDGITE DIITELSKIK GLNIFSRPTV LAYRDKQVTP AHIGQQLRAA YVLAGSLRRS GNRLRITTQL VDTTTDFPIW SERYDREMKD VFEVQDEIAG KIAQALRVTL SPQEQQEIAA KPTDNLQAYD LYLRGKSYAR RLQRQDLEFA LQMFENAVIL DPNFALAFAA IANVCAQNHY NYGRDPEWMQ RAMHASETAV VLRPDLPEVQ VGQAWILYAN NKYDEATAVI QRAIERKRDC EGAYYILFRT LFSAGRYQEV ANLAEAAVEA SGDDYNIYVP IMNSLGALGK TEALRNFRQR DISALERHLK QVPEDARARI LLATDYATEG RMEEAARETS LAMTLRPNEA TVLYNAACVF CTMNKKSEAM DALAKAWHAG FKDPAWVRRD PDLELLHGDP EFERLYPPNA TGAIAN
|
| |