| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3925 |
|---|
| Symbol | |
|---|
| ID | 4071308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4640501 |
|---|
| End bp | 4641082 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637985951 |
|---|
| Product | putative phophoslipid binding protein |
|---|
| Protein accession | YP_592999 |
|---|
| Protein GI | 94970951 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.679907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.189185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAG CGTTTGGACT CCTATTGGCT GCGCTGCTCA GCACCGCGGC ATTCGCACAA
ATCAAGATTG ATCCCGTCGT CCCCGACGTA AAGGCCGTTG CCAGTCCTTC CGGCGATAAG
AACGAAACCC GCATCGCCAA GGAAGTGCGA CATGAGCTGC TGATGCTTCC CTACTACAGC
ATCTTCGACG ACCTCGGCTT CGAAGTGCGC GGGGCGAACG TCGAACTCAA CGGCGCAGTG
AATGACGGCA CCCTTATCAA ACAAGCTGAG AATGCAGTGA AAGACATAGA AGGCGTTGGC
ACTGTTACCA ACAACATCAA GTTGCTCACA CCGTTTCCCG ATGACGTGCG TATCCGTCGC
GAAGCTTACC GCAAGATCTT CAGTACGGGC GGGCTCTCGC AATATGCGTG GGAAGCGGCG
CCCAGCATCC ACATCATCGT GGACCGAGGA CGCATTCGCC TGATCGGTTA CGTGAATAAT
CAGGGAGACA AGGACTTGGC CAACATCGCC GCGAATGGCA TCCCGGGCGT ATTCGGAGTG
ACGAACGAAT TGCAGGTCGT TAACGGCAAG CAGAGCAAAT AG
|
|---|
| Protein sequence | MKRAFGLLLA ALLSTAAFAQ IKIDPVVPDV KAVASPSGDK NETRIAKEVR HELLMLPYYS
IFDDLGFEVR GANVELNGAV NDGTLIKQAE NAVKDIEGVG TVTNNIKLLT PFPDDVRIRR
EAYRKIFSTG GLSQYAWEAA PSIHIIVDRG RIRLIGYVNN QGDKDLANIA ANGIPGVFGV
TNELQVVNGK QSK
|
|---|
| |