Gene Acid345_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3891 
Symbol 
ID4072226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4603471 
End bp4604178 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID637985915 
Producthypothetical protein 
Protein accessionYP_592965 
Protein GI94970917 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.356516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.457869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGCC GTTATCGCCT GACGCGCAAA AAAGAGATCC TCGCCGAGCA TTTCGGCATT 
GAGCCACCCG ACAACTGGCA GCCGCGCTAT AACGTCGCGC CCGGCCAGGA GGTGCCCGTC
ATTCGGCAAG ACGCCGAACA ACCGAGGCGC TACGGCTCCA ACATGAAGTG GGGGCTCATC
CCCTTCTGGT CGAAAGACCC CAACATCGGC TTCAAGATGA TCAACGCGCG CTCCGAAGGC
ATTACCGAAA GGGCGGCATT CAAAGAAGCC CTCAAGAAAC GCCGCTGTCT GATTCCCGCC
GACGGCTTTT ACGAGTGGCA GAAATCCGGC AACAAGAAGC GCCCCTTTTG TTTCACCATG
TCCGACGAAT CGCCCTTCGC CTTCGCAGGC TTATGGGAGC GCTGGAAAAA TCCCGAGGGC
CAGTGGATCG AGACCTGCTC GATCATCACC ACGACTCCCA ACAAACTCAC GGAAGATGTG
CACGACCGCA TGCCGGTCAT CCTGCATCCA GACGACTACG ATCTCTGGCT CGACCCCGGC
TTCCAGAAAA CTGAAGACCT CGTTGCCCTC CTCAAACCTT ATGACCCCGA AGCCATGTCG
CGCTACGAAG TAAGCGACCG CGTAAACGCC GTGAAGAATG ACGATCCCGA ATGTGTGGCG
CCCGTACAAC CGGAACCCCC GGAAGCGCAA GCCACGCTCT TCGGCTGA
 
Protein sequence
MCGRYRLTRK KEILAEHFGI EPPDNWQPRY NVAPGQEVPV IRQDAEQPRR YGSNMKWGLI 
PFWSKDPNIG FKMINARSEG ITERAAFKEA LKKRRCLIPA DGFYEWQKSG NKKRPFCFTM
SDESPFAFAG LWERWKNPEG QWIETCSIIT TTPNKLTEDV HDRMPVILHP DDYDLWLDPG
FQKTEDLVAL LKPYDPEAMS RYEVSDRVNA VKNDDPECVA PVQPEPPEAQ ATLFG