Gene Acid345_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3889 
Symbol 
ID4072224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4601342 
End bp4601743 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content59% 
IMG OID637985913 
ProductCopY family transcriptional regulator 
Protein accessionYP_592963 
Protein GI94970915 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.976085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGTA ACACTCCCTT AGCACACGAT CCCGCCGAAC TCGGCGACCT CGAACGCGAT 
GTCCTTGAAA TCGTCTGGAA GCGTGGTACG GCTTCGGCCG AACACGTCCG CGAAGAGATT
AATCGTCCGT TGAAAGACTC AACCATCCGG ACCGTTCTAC GGCGCCTGGA AGAGAAGGGC
TATCTCGAAC ACGAAACCGA GCAACGCACC TTCATCTACC GTCCCTCCGA ATCGCGCCAA
CGCGTTGCCG GCCGCGCCGT GCAGCAGATC GTAGATTGGT TCTGCGGCGG CTCTGTGGAA
GAGTTGCTCG TTGGCATGGT TGACTCCAAA GTCGTAGGCC GCGCCGAACT CGAACGCCTC
GCCCGCCGGA TCGCTGCTGC GAAGAAGGAG AGCAAGTCAT GA
 
Protein sequence
MERNTPLAHD PAELGDLERD VLEIVWKRGT ASAEHVREEI NRPLKDSTIR TVLRRLEEKG 
YLEHETEQRT FIYRPSESRQ RVAGRAVQQI VDWFCGGSVE ELLVGMVDSK VVGRAELERL
ARRIAAAKKE SKS