Gene Acid345_3851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3851 
Symbol 
ID4071003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand+ 
Start bp4560456 
End bp4561121 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID637985875 
Productputative anti-sigma factor 
Protein accessionYP_592925 
Protein GI94970877 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.698758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGTT CCGACACGAG GCCGCTGTTG TCGCTGTACC TCGATGGGGC AACATCGCGC 
GAACAGCGCT CCGCCATCGA GCTGCACATC AAGACTTGCG ACGCCTGCAG TGATCAGTAC 
CGGCAGTTGC GTCGCACTCA CACGCTGGTT GCCGCCGTTG GGCGTAAACC GGCGCCTCCG 
GACCTCGCGC TCCGTCTGCG CGTCGCCCTC TCGCAGGAGA TCGCCGCCTC ACGCCGTTCG 
CCATGGACCG GCATCGCCGT CCGCATCGAA AACGCATTCA ACGCTTTCAT GGTTCCCGCC 
GCTGCGGGCG TCGTGACCGC CGTCATTGTC TTCGGGCTGC TGATCGGACT GCTCGTCCCG 
ACCGCCATGC GCAACTCCAA CGACGTCCCA ACCATGCTCT ACACTCCGCC GGAAATTTCC 
TACTCTCCGT TCGGTCTCAG CATGGGTTCG GTCAACGCCG ATTCGCTCGT CGTGGAAGCG 
TATGTCGATT CCAACGGCCG TGTGCAGGAT TTCAGGATCC TCTCTTCGCC CGGCGACACC 
AAGGACCTGA CGCCAGAATT GAAGAACATG CTGATCTTCA CCACCTTCAA GCCGGCCACG 
GCCTTCGGCC AGCCAACTTC AGGAAGGGCG ATCCTGTCGT TCTCGAACAT CCAGGTGAAG 
GGCTAA
 
Protein sequence
MKCSDTRPLL SLYLDGATSR EQRSAIELHI KTCDACSDQY RQLRRTHTLV AAVGRKPAPP 
DLALRLRVAL SQEIAASRRS PWTGIAVRIE NAFNAFMVPA AAGVVTAVIV FGLLIGLLVP 
TAMRNSNDVP TMLYTPPEIS YSPFGLSMGS VNADSLVVEA YVDSNGRVQD FRILSSPGDT 
KDLTPELKNM LIFTTFKPAT AFGQPTSGRA ILSFSNIQVK G