Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3847 |
Symbol | |
ID | 4070999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4556452 |
End bp | 4556901 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637985871 |
Product | hypothetical protein |
Protein accession | YP_592921 |
Protein GI | 94970873 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.354276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TTTGGTTGGC GGTGGCAGCG GTGGTGCTGG TTGGAGTGGT GGCAGCGACG GCGCAGAGCG CGGGGATGCT GCGGCGTCAC GGGGCACGGA ACTTCTGGGT GCGGCACATT ATGGCGGACC TGGATATCAC GGATCAGCAG CGAGAGCAGA TCAAGCAGGT TTTGAAAGAC GAGAAGCCGA ATATCCAGGC GCTGGTACAG CGCGCGGAGG CCGAGCGCGT GGAGTTGCGG ACGATGAACA CGTTTGACGA GGCGAAAGTG CGCAGTGTGG CAGAGAGTAA TTCGTCTCTG TATGTGGACG CGATCGTCGA GCGCGAGAAA GTAAGAACGA AGATATTCAC GGTGCTGACA CCGGAGCAGC GGACGAAGGT CAACAAGATG ATCGAGCAGT GTCATGAGGG AGTGCAGGAG CGGTTGGAGA ATTTGGGGGA AGAGTTGTGA
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Protein sequence | MKKIWLAVAA VVLVGVVAAT AQSAGMLRRH GARNFWVRHI MADLDITDQQ REQIKQVLKD EKPNIQALVQ RAEAERVELR TMNTFDEAKV RSVAESNSSL YVDAIVEREK VRTKIFTVLT PEQRTKVNKM IEQCHEGVQE RLENLGEEL
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