Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3838 |
Symbol | |
ID | 4071122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4541893 |
End bp | 4542657 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637985861 |
Product | LytR/AlgR family transcriptional regulator |
Protein accession | YP_592912 |
Protein GI | 94970864 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.479778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCCTG CGCCCATTCG GGTGATCACC GTGGACGACG AACCCTTCGC GCTGCAACGG ATTTCTCGTC TGGTGCGGGA GGAGCCCTCC TTGTCGCTGG TTGCTGAGTG TTCGTCGGCC GCAAGCGCCA TCGAGAGTAT TTGCGAGCTT CGTCCGCAGG TTGTGTTTCT CGATGTGCAG ATGCCCGAAG TGGATGGCTT CGGAGTGCTC GATGCCTTCC AGGGTCCTAC GCTTCCCTGG GTGGTATTTA CGACGGCGTA CGAGGAGTAC GCTGTCCGCG CGTTCGAGGC GAGCGCGGTG GATTACCTGC TGAAACCGAT CAGCCAGGAA CGTTTTTCGG CGGCCGTCGG GAAACTCAAG ACCGCAGCCA ATTCCGTAGG CACGTCCAAT GCCCGGTCGG GTCTGGACGC TTCGCGTTAC GAGCGGATCC TGATCAAGAC GGATGGAAAG TTTGTGATGC TGGATCCGGG GCAAGTAGAA CGAATTTCTG CGGCCGGAAA TTATGCCATC GTGTATGCCG CCGGGAAGTC TTACATCATT CGCGAAACCA TGACGCGGAT CCAATGTCGC GTTGACCCGC GTCGGTTCTT TCGAGTCAAT CGGTCTGAGA TTGTGAATCT CTCGTTCGTT CAGGAATTAG AACCGACGTG CCATGGAGAG TATTCGATCA CCACGATTTT CGGCACGAAA GTCACTCTCA CAAGGACCTA CCGCGATGCG TTGCAACGCA TGCTTTCCAT GACTCGTTCG GGAACCAGGG TGTAG
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Protein sequence | MSPAPIRVIT VDDEPFALQR ISRLVREEPS LSLVAECSSA ASAIESICEL RPQVVFLDVQ MPEVDGFGVL DAFQGPTLPW VVFTTAYEEY AVRAFEASAV DYLLKPISQE RFSAAVGKLK TAANSVGTSN ARSGLDASRY ERILIKTDGK FVMLDPGQVE RISAAGNYAI VYAAGKSYII RETMTRIQCR VDPRRFFRVN RSEIVNLSFV QELEPTCHGE YSITTIFGTK VTLTRTYRDA LQRMLSMTRS GTRV
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