| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3816 |
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| Symbol | |
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| ID | 4071100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4511074 |
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| End bp | 4513011 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637985839 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_592890 |
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| Protein GI | 94970842 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.280981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTATCA ACGAAATTCC GCAGTTTCCG AGGTGGTTTA CAAAAATCCA GCGTACGAGA
ACTGGACTCA GTCTGCTCCT GCAGGCTGCC ATTAGCGCGG TTGCTCTGCT TTGTGCCTGG
ACCTTGCGAT TCGAATTTGC GTTGCCCAAT CAGCGACTGC TGTGGGTCTC AGTGCCCATC
CTGGTGTTCC TTCGAATTGC GGCGATTTAC CGCTTCAACC TTGATCATGG GTATTGGCGT
TTCAGCGGCA TCTCTGATGC CTTGAATATT GCCAAGGCCG TCACTGTCAG TTCGTTCTGC
TTCATGCTCG TTCTCCGATA CGGATTTCAG CTGACAGCTT TCCCAATCTC TATCTATTTG
CTTGAGCCGC TCTTGTCTGC GTTCGGATTG GGAGCAAGCC GCGTCGCGGT TCGCAGTGTG
TTGGTCAAAC TGGAGGCATC GCAAGGTAGA AAAAGGCATT CTCGCGTCGT CATAGTGGGA
GCAGGGTTTG CCGGGCAGAT GTTGCTGCGC GAACTGCTCA CATCGCGTGC CAGTCACGTC
GCCGTCGCAC TCGTGGATGA TGACTCCTCG AAGCGTGGGG CTCTGGTACA CGGCACGCGT
GTCGAAGGGG CGATCAAGAA TCTCCCGACG ATTGCTGCAA AGCATCGCGC GGACGAGGTT
CTTATCGCGG TGCCATCTGC GACGCGTGAT CAGATGTTTC GAATTGTTGA AGCTTGCCAT
GCGGCGAGAG TGCCATACCG CACGGTGCCG AGTCTCAACG ATCTCGTGGC GGGGAAGGTG
GCGATCAGCG AACTTCGTGA GATCGATCTG GAAGATCTTC TCGGACGTGA ACCGGTGCAT
CTGGAAAACG AGCCGGTTCG CAAGAGTATC GCTGGCCGGG TTGTAATGGT AACTGGAGCC
GCGGGGTCCA TTGGCTCGGA ACTCAGTTCC CAGATACTAT CGTTCGGCCC GGCGATGTTG
ATCTGCGTCG ATCACGATGA AACCGCCCTA TTTAATCTTG AACACCGGCT CGCGGTACAG
GAAACGAGCA GCCGGCTTTT GTATTTTGTA GACGATGTCG GCGATTCTGA GCGGATGCGT
CATCTGCTGC TGCACAACGA GGTGGATTTC ATTTTCCACG CAGCTGCGTA CAAGCACGTT
CCGATGATGG AACGCAATCC TCGAAAGGCT TTGCGCAACA ATGTCTTCGC GCTCCGGCAT
TTCGTCGAGG CAGCAGAAGA GTCTGGAGTC GAGGCGTTCG TTTTGATTTC CTCCGACAAG
GCGGTTAATC CCACGAACGT GATGGGGTGC ACGAAACGTA TCGGTGAGTT GATCTTGTCG
GCAAATCGAA ATCGGCGAAT GCGTTGCGTG AGTGTGCGGT TCGGAAATGT GCTGGGTTCG
CAGGGAAGCG TGGTTCCGAT CTTTCAGCAA CAGTTACGCG AACACAAGCC GCTCACGATC
ACTCATCCCG AGATTACCCG CTTCTTCATG ACGGTCTCAG AGGCGGTATC TCTGGTGCTT
CAGGCGTTTA CAATTGGAAC TCACGGCGAC ATTCTGGTTC TCGATATGGG GCGTCAAATC
TCGATTGTTC GCATGGCGAA AGCGCTAATC CATCTCTCCG GATTCTCCGA GGAAGAGGTG
CCGATCAAAT ACACGGGATT ACGTCCTGGC GAGAAACTGT ACGAAGAGCT GTTTTATGAC
TCGGAAGTCC GGATTGCGAC GGAGCGCTCG AAGGTTCTTC GCACCAAAGG GAAGATTCTC
AGTTGGGCCG AGTTAGATCG GCGGCTCCGA ACTTTGGAGT GGAAGTTAGG TGAGGCAAAC
GAGGATCAAC TCCGACGCCT GATGGCGGAA ATTGTTCCCG AGTACTCAAT CACGCCCAAC
GAACAGCGTC CATTGCCTGC GTCAGTCCCG ATCGCGAGCA GTGTGCACGG CAGGCATGCT
GCCGCGGGAC TGGATTAA
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| Protein sequence | MSINEIPQFP RWFTKIQRTR TGLSLLLQAA ISAVALLCAW TLRFEFALPN QRLLWVSVPI
LVFLRIAAIY RFNLDHGYWR FSGISDALNI AKAVTVSSFC FMLVLRYGFQ LTAFPISIYL
LEPLLSAFGL GASRVAVRSV LVKLEASQGR KRHSRVVIVG AGFAGQMLLR ELLTSRASHV
AVALVDDDSS KRGALVHGTR VEGAIKNLPT IAAKHRADEV LIAVPSATRD QMFRIVEACH
AARVPYRTVP SLNDLVAGKV AISELREIDL EDLLGREPVH LENEPVRKSI AGRVVMVTGA
AGSIGSELSS QILSFGPAML ICVDHDETAL FNLEHRLAVQ ETSSRLLYFV DDVGDSERMR
HLLLHNEVDF IFHAAAYKHV PMMERNPRKA LRNNVFALRH FVEAAEESGV EAFVLISSDK
AVNPTNVMGC TKRIGELILS ANRNRRMRCV SVRFGNVLGS QGSVVPIFQQ QLREHKPLTI
THPEITRFFM TVSEAVSLVL QAFTIGTHGD ILVLDMGRQI SIVRMAKALI HLSGFSEEEV
PIKYTGLRPG EKLYEELFYD SEVRIATERS KVLRTKGKIL SWAELDRRLR TLEWKLGEAN
EDQLRRLMAE IVPEYSITPN EQRPLPASVP IASSVHGRHA AAGLD
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