Gene Acid345_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3718 
Symbol 
ID4070468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4396104 
End bp4396664 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content52% 
IMG OID637985741 
Producthypothetical protein 
Protein accessionYP_592793 
Protein GI94970745 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00204077 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA CATCTACTGA AACAACGAAT GTGTGGGCAG GCATCATAGC GCGAATCGAT 
CCAATCGGAC ATGCGTTTCT GCGCTACGGT TTGGCGGTCG TAATTGGTTG GATCGCAGCG
ATGAAGGTCA CGGAATACGA GGCGAAAGGC ATTCAACCTC TCATTGCGCA TAGTCCATTT
CTGGGCTGGG GCTACAGCAT TTGGACTGTG CGTCAGCTCG CGATGATAAT AGGCGCCATC
GAGCTCGCCA TCGCTGCGTT GATTGCGATT CGTCGCTGGT TTCCGAAGCT ATCTGCTATC
GGAAGTGTAG GCGCGGTGTT CATGTTTCTG ATCACGTTGT CATTCATCAT CACAACTCCA
GGTTGGGAGC CAAGCCTCGG CGGTTTTCCT GCGCTTTCAG CTGGTATAGG AGAGTTTCTG
ATAAAAGACC TGGTTTTGCT CGGAGCCTCG CTATGGACAC TGACGGACTC GCTCACTGCC
GTCTCCTTTC AGCCCGACAT CGACGTCGAA CCACTCAAGA AACAGGAACG AGATACTGTC
TTGCCTCATC GCGTCCACTG A
 
Protein sequence
MKNTSTETTN VWAGIIARID PIGHAFLRYG LAVVIGWIAA MKVTEYEAKG IQPLIAHSPF 
LGWGYSIWTV RQLAMIIGAI ELAIAALIAI RRWFPKLSAI GSVGAVFMFL ITLSFIITTP
GWEPSLGGFP ALSAGIGEFL IKDLVLLGAS LWTLTDSLTA VSFQPDIDVE PLKKQERDTV
LPHRVH