Gene Acid345_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3641 
Symbol 
ID4070161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4310710 
End bp4311342 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID637985664 
Productnegative transcriptional regulator 
Protein accessionYP_592716 
Protein GI94970668 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.691719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.578419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCATTC GCGAACGCTA CGCCGCCTCG CAGGAAGACA TCCTCGCCAC CATTCGCCAG 
TATCCTCTTG CTACGCTCGT AAGCCAGGAT GCACGGGGTT TCACCGCGAA CCATCTGCCG
CTGGTGATTG ATCCTGCGCG CGGACCGCAT GGGACGCTGA TTGGGCACTT CACGCGGCAG
AACCCACAGC ATGCGGCTTT GCGAGCTGAT TCGCGGGTGA TGGCGGTGTT CAACGGGCCG
GCGGGATATG TCTCTTCGAG TTGGTACTCC ACCGGGCGCG ACATGGCGCC GACGTGGAAC
TATGCTGCCG TGCATTGCCA CGGCACGCTG ACGCTGGCAT CCAGCGAAGA GCAGACGGTC
GCGGCACTGC GCGCGCTACT CAATCATGTT GAGCAGAACA TGCCGAATGC TTGGCGCATG
GAGGAACTCG GACCCGATGG GCTGGAACGT CGACTGCCGC ACATTATCGG GTTCGAGATT
GCGATCGAGC GCATTGAAGC GAAGCTGCAG ATGAGCCAAT ATGAGCGGCC CAAGGACACG
GCGGAGGCCA TCGACGTGTT ACGGGCGCAA GGACAGGAAG ATCTTGCGGA TACGATGCAG
CGGTGCAACT TCGGGCAGAA GCATTCGCAG TGA
 
Protein sequence
MFIRERYAAS QEDILATIRQ YPLATLVSQD ARGFTANHLP LVIDPARGPH GTLIGHFTRQ 
NPQHAALRAD SRVMAVFNGP AGYVSSSWYS TGRDMAPTWN YAAVHCHGTL TLASSEEQTV
AALRALLNHV EQNMPNAWRM EELGPDGLER RLPHIIGFEI AIERIEAKLQ MSQYERPKDT
AEAIDVLRAQ GQEDLADTMQ RCNFGQKHSQ