Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3631 |
Symbol | |
ID | 4070151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4298946 |
End bp | 4300307 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985654 |
Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
Protein accession | YP_592706 |
Protein GI | 94970658 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.916376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTTC GAGGGAAGCG CGTACTGGTT GTCGGGTTAG GGAAGTCGGG CATTGCGTCG GCAACGTTCT TGCAGGCACA AGGCGCGAAG GTGACTGTTT CGGATTCGAA GTCGGAAGCG CAGCTTCGCC AGGAAATTCC GCTCCTTCTC GACAAAGGCA TCACGGTCGA AACCGGCCAT CACGGCGAGC GTACTTTCCG CGACCAGGAC TTGATCGTCA TCAGCCCCGG TGTTCCGTTC GATCAGCCGC AACTCGAGCA GGCCCGCAAG CAGGGAATTC CCGTCATCGG CGAGATCGAA CTCGCGGCCC AGTTTGTTCC CGGTCACGTC ATAGCCATCA CCGGCTCCAA CGGCAAGACG ACCACGACCT CTCTCTGCGG CGACATTCTG CAATCCGGCG GCAAGAAGAC GCTTGTCGGC GGCAACATCG GCACGCCGGC CATAAGCTTT GCCCAACTTG CCAATGACGA CACTTGGAGC GTCCTCGAGA TTTCCAGCTT CCAGTTGGAG ACCATCGAGC GCTTCCGCCC GGAAATCGCG GCGATCCTCA ACATCACGCC GGATCACCTC GATCGCCACG GGACCTTCGA GAAGTACGCC GCCGCCAAGG AACGCATTTT CGAAAATCAG CGCGAGCACG ACTTCGCCAT CCTCAACGCC GACAACGAAC CGTGCGTTGA GATCGCCAAG CGCGTGAAGT CGCAGGTGCT CTGGTTCTCG CGGCAGCACG AAGTGAAGCA CGGCACCTTC GTCCGCGAAG ACAAGATCTA CTTCCGCGAT CCCAAAGGCG AGCGCGAGAT CATGCCGGTT GCCGACATGC TGCTCAAAGG CGCGCACAAC GTCGAGAACG TTCTCGCCGC AGTTTGTGTA GGCGTCGCCG CCAGTGTTGC GCCCGAGCAG ATTCGCAAAG CTGTCTCGCA GTTCAAAGCC GTCGAGCATC GCCTCGAATA CACCGCCACC GTCAAGGGCG TGGACTACTA CAACGACTCC AAAGCCACCA ACGTGGATGC GACCATCAAG GCCCTCGAGT CCTTCAGCAA GGGTGTGCAC CTCATCCTCG GCGGCAAAGA CAAAGGCAGC CCCTACACCG TGCTCAACGA TCTCCTCCAC GAGCGCGCCA AGACCGTGTA CACCATCGGC GCAGCGGCAG CGAAGATCGA AGCCGAAGTA AAAGGTGTGG AAGTCGTCCA CGCCGAGACC CTCGAAAACG CCGTGAAGCT TGCGTCGCAA AAAGCGGTGA AGGGCGACGT TGTCCTGCTC GCGCCTGCCT GCGCCAGCTT CGACCAGTTC CAGAGCTACG AGCATCGCGG ACGCATCTTC AAAGAGCTCG TCCGCAAGAT GGCAGAGCAG GAGAAGAAGT AG
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Protein sequence | MDVRGKRVLV VGLGKSGIAS ATFLQAQGAK VTVSDSKSEA QLRQEIPLLL DKGITVETGH HGERTFRDQD LIVISPGVPF DQPQLEQARK QGIPVIGEIE LAAQFVPGHV IAITGSNGKT TTTSLCGDIL QSGGKKTLVG GNIGTPAISF AQLANDDTWS VLEISSFQLE TIERFRPEIA AILNITPDHL DRHGTFEKYA AAKERIFENQ REHDFAILNA DNEPCVEIAK RVKSQVLWFS RQHEVKHGTF VREDKIYFRD PKGEREIMPV ADMLLKGAHN VENVLAAVCV GVAASVAPEQ IRKAVSQFKA VEHRLEYTAT VKGVDYYNDS KATNVDATIK ALESFSKGVH LILGGKDKGS PYTVLNDLLH ERAKTVYTIG AAAAKIEAEV KGVEVVHAET LENAVKLASQ KAVKGDVVLL APACASFDQF QSYEHRGRIF KELVRKMAEQ EKK
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