| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3576 |
|---|
| Symbol | |
|---|
| ID | 4072798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4227221 |
|---|
| End bp | 4228051 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637985599 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_592651 |
|---|
| Protein GI | 94970603 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA AAGTTGACTC CAAGCGATTT GGCCCATGGG CGCTCATTAC GGGTGCTTCT
TCGGGTATAG GCAGGGAATT TGCACGCCAG GTTGCCGCGT CGGGTATCAA TGTGGTGCTC
GTGGCGCGGC GAGAACCCCT CCTCCAAGAG GCAGGGGCCG AGTTCAGCAA AACCTACGGG
GTTGAGCACC GCATTGTTCT GGCTGATCTC TCCGAGGAAG GCTTCATGGA CAGGCTCATT
CCCGCGACAG ATGACCTCGA TATCGGCCTC GTAATTTCCA ATGCGGGCAC CGCTAGCCCT
GGCGAGTTCC TGAAACGTGA TCGCGTCAGT ATGCTCGAAA TAATCCGGCT CAATGCTCTT
TCACACCTGG AAATCGCTCA CCACTTTGGC GAGCGGCTGG CCCGACGTGG TCGCGGCGGG
CTGCTCATGA GCGGCGCGAT GGGCGCGATG GTCGGGCTGC CATTCATGGC GGCAGAAAGT
CCGAGCAAGG CCTTTATCCA GACGCTGGGC CAGGCCTTGC ACGTCGAGTT CGCCCCGTTG
GGCGTGAATG TCACGGTCCT TGTCATCGCA CCCACGGAGA CAGCAGTCAT AGCCAAAATC
GGATTCGATC ACCATAATAT GCCGACGGAG CAGATGCGGA TGAAGCGGAT GCCAGTGGAA
CAGTGCGTGC GAGAAGGCCT CCTCGCGCTC CAACGCAATC GAGCGACTCA TCTTCCGGGT
CGGACAAATC GCATCGCGAA CGCCCTCATG CCCCCCTCGA TCGCACGGCG GATTATGGGC
AAGATGTTGG GCAGGGCAGT CGCTGCCCGT TCCCGGACGG CTTCTACATA A
|
|---|
| Protein sequence | MKTKVDSKRF GPWALITGAS SGIGREFARQ VAASGINVVL VARREPLLQE AGAEFSKTYG
VEHRIVLADL SEEGFMDRLI PATDDLDIGL VISNAGTASP GEFLKRDRVS MLEIIRLNAL
SHLEIAHHFG ERLARRGRGG LLMSGAMGAM VGLPFMAAES PSKAFIQTLG QALHVEFAPL
GVNVTVLVIA PTETAVIAKI GFDHHNMPTE QMRMKRMPVE QCVREGLLAL QRNRATHLPG
RTNRIANALM PPSIARRIMG KMLGRAVAAR SRTAST
|
|---|
| |