| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3572 |
|---|
| Symbol | |
|---|
| ID | 4072794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4222579 |
|---|
| End bp | 4223184 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637985595 |
|---|
| Product | ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_592647 |
|---|
| Protein GI | 94970599 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.168906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTG AAATGGTCGC AATCGTCGGC GATTCAGGCT CCGGGAAAAG CTCACTTTTG
CACATCCTCG GTGCCCTTGA TAGGCCTTCG GACGGTGACG TATACTTCGC GGAACTCAGG
CTTGCAAAGT TATCTGAGGC CGCGGCAGCG GAGTTCCGTA ATCGTGAACT CGGGTTCGTG
TGGCAGTTCC ACTACCTCCT ACCCGAATTT ACGGCGCTTG AGAACATCGC CATGCCGTTG
CTGGTCAGAG GCTTGGGACG TCGCGAGGCC GAAACTGAGG CCCGCCATTG GTTGAATGAA
GTCGGCTTGT TGGACCGCGG CCATCATCGG CCCGGCGAAC TATCCGGGGG AGAACAACAG
CGTGTTGCTC TTGCTCGGGC TTTGGTTACA AGGCCCAAGG TGCTCATGGC AGACGAGCCA
ACCGGCGACC TCGATAACCG TACGGCGGAG ACAGTTTTTA ATTTGATTGC CAGGCTACAT
CGCGACTATC AGCTCACCTC CCTCATCGTC ACCCACAACC TCGCGTTTGC GCGACGCTGC
GACCGGGTTA TCCGGCTGGC GGCTGGTGTC GTGGATGAGG TAGAGCCACA GTCGTTACCG
GCATAG
|
|---|
| Protein sequence | MKGEMVAIVG DSGSGKSSLL HILGALDRPS DGDVYFAELR LAKLSEAAAA EFRNRELGFV
WQFHYLLPEF TALENIAMPL LVRGLGRREA ETEARHWLNE VGLLDRGHHR PGELSGGEQQ
RVALARALVT RPKVLMADEP TGDLDNRTAE TVFNLIARLH RDYQLTSLIV THNLAFARRC
DRVIRLAAGV VDEVEPQSLP A
|
|---|
| |