Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3506 |
Symbol | |
ID | 4072765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4138891 |
End bp | 4142478 |
Gene Length | 3588 bp |
Protein Length | 1195 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637985529 |
Product | Cna B-type protein |
Protein accession | YP_592581 |
Protein GI | 94970533 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.378795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAA CCGTAATTCG GGTACTCGCG GTTCTGGCTC TCTTGTTTGT GTTTACGTCG CTGGTGTTTG GCCAGGCGGA AACCGGACAG GTGACGGGAA CGGTGACGGA CCCCTCGGGA GCAATCGTTG CAGGCGCCAA GGTCACGATT ACCGACGTGA ACACCGGCGC CCAGCGTACG GGCACGACGA ATAGTTCTGG CTCGTACACA TTCACGAACC TGAAGCCGTC TACCTACGAT GTTGTAGTGG AAGGATCCGG TTTCGCGAAA TTCACCCGGC GTGTTGATGT GACCGTCGGT TCCAAGAATG AAGTATCGGC CCAGATGTCA GTGACCGGTG GCGGTACGAC GGTCGAAGTA ACGGCAGAAG GCGGAGCCGC TCAGGTCAAC ACTGAGTCGC AGACGCTTTC GACGGTTGTA ACTTCGAAGC AGGTGACGGA GCTTCCGACC CTGACCCGTA ACCCCTATGA CCTGGTTGCA ACCTCGGGCA ACGTCAACGA CGATCCTTCG GCGCGTGGCG CAGGCCTGTC GATTAACGGC CAGCGTTCGG CTTCGACGGA CATTCTTCTG GACGGCGGCG AGAACGTGGA CTTGTTCACG GCGACCGTTG GTCAGTCAGT TCCTTTGGAT TCGGTGCAGG AATTCCGCGT CATCACGAGC GACTTCTCGG CCGAATACGG CCGCGCATCG GGCGGCGTGG TGAACGTGGC CACGAAGTCG GGTACTAACG CGTTCCACGG CACGGCATAC GAATTCAACC GCGTGTCGGC ACTTGCAGCC AACACTTACA TCAATGATTC GACCCGTTAC GATGCCTTCA ACGGCGTTCC GATCGATGGG CTCGACCCGA CCTGCGTCGT CGGACAGCCT TGCGATGCCG GCAAGAAGGG TGGTTTCACG CGTAACCAGT TCGGCTACTC CATTGGCGGC CCGGTGGTGA AGAACAAGTT GTTCTTCTTC TCGAGCACGG AATGGACGCG CGTCCGCAGC AGCGCTACGC AGAACGCAGC TGTGATCGAT CCTTCGTTGA TCGGTTCCGG CTACCTTGCT CCGAACGTTG TGGATTTTTT GAACTCGGCG AGCCTCCGTT CCAGCGCGAC GACAGTCGGT CATGTCACTT GTGATCAGAC CATAACCCCG ACGAAGCCGC TGGGTCAGTG TCCGACTGCC ATTCCTGGAA GCCAGGATCT GTATCAGCTC GTGTCGTTCA CGCTGCCCAA TGATTCGGGC GGCGGCGCAC CGCAGAACAC CTACTCCACC GTTAACCGTG TGGACTGGAA CATCAGCGAT AAGACAACTC TCTACGGCCG CTACGCGTTG TACAGCGAAG CCGATGCTGC GGGCACGAAC AGCTGGAGCC CGTACGATGG TTTCGATACC GGCACGAATG TCTTCAACAA CAATCTCAAT ATCAACCTGA CCCACGTGTT CACGCCGAAC TTCGTGAGCC AGTCGAAGAT CATTTACAAC CGCCTGAACA ACCAACAGCC GCTCGGTGCT GCTCCGATCG CTCCGACGCT GTACTCGCAG GCGAACACCG TGCCCCGCAT CAACGGTGCG GAGCTTCTCT ATCCTGGGTA TCTGCCGTTC AGCCCGGGCA ACGCGATCCC GTTCGGTGGA CCGCAGAACC TGTACCAGCT CTACCAGGAC TTCTCCTGGA CCAAGGGCAA GCACCAGTTC CGTTTCGGCG GCGACTACAT CCAGACCCGC GACAATCGCG TGTTTGGTGC TTATGAGACC GCGGTTTCGA TTCTGAGCAA CGGCAATGCC GACCGCGCGA TCAACAACCT CTTTTCCGCA GCCTCAGGCG GCGGCGATGG CACCCTGGAT TTGTTCGAAG TCGGCGTGAA TCCGCAAGGC GCATATCCCT GCCCGCGTTA CCTCACTCCG AAGCCGGCTT ACTGCCAATA CACCACTCCG GTCGGTCCGC CGTCCTTCTC GCGTAACAAT GGCTACAACG ACGGCGCGTG GTACGTGCAG GACAGCTGGA AGATTCACCC GCGCGTGACC TTGAACCTCG GCCTGCGCTG GGAATACTAC GGCGTGCAGC ACAACTCCGA CCCGAACCTC GAGTCGAACT TCTACGAGGG TCCGGGATCG TCCCTGCCGG CGCAGATCTA CAGCGGCCAG GTCATGATTG GAAAAGACAG CCCGTCCAAC GGTCTGTGGG ACAAAGACAC CAACAACTAT GCTCCGCGCA TTGGTTTTGC GTGGGACGTG TTTGGCGATG GCAAGACTTC CATCCGTGGT GGTTACGGCA TCAGCTACGA ACGTAACTTC GGCAACGTCA CGTACAACGT GATTCAGAAC CCGCCGAACT ATGCGGTCGT CACTGCCGGC GGCATTCCTT TGACCACTGG CAACTACGAC TCGATCAACG GCGGCCTGCC CGATGGAACG CTCATCGGCT TGAGCCAGCC CAGCCTGCGC TTGGTATCTC CGCACATCAA GACTGCCTAC TCCGAGTTCT GGAGCTTGAG CCTTGAGCGC GAAGTTCTCA AGAACAGCAT CCTGGCGTTC GAATACTCCG GTTCGCACGG TGTGCATCTT TATGACATCG GCAACGTGAA CAAGGCCGGC TTCGGTAACT ACTACGATCC AGCCGACATG CAGGCGTATG CCACGGGCGT TCTCGGTCTT GCTGATGCGT CCGACATGCC TTGCTACCCG CTTTGCAAGT TGAACCAGCA GTACGGCAAT GCCAACAACC GTGGTGACCA GGGCTTCTCG CATTACAACT CCCTGAACAC CCGGTTCACC TCGAACAACC TGTTCAACCT CGGACTGCAG TTGAACTTCA ACTGGACCTG GTCGCATGCC ATCGACAACC TGAGCAACAC ATTCAGCGAA GGCTCGAACA GCTTCCAGCT TGGTTACACC GACTACTTCC ACCCGAACCT TGACACCGGC AGCGCGGAGT TCAACGCGAC GCACCGCCTG GCGATCAGCG GCGTGTGGGA CATGCCGTTC GGCAAGAAGT CGAGCAACGG TTTCGTTCGC GCAGCTCTTG GCGGATGGAG CGTTTCTCCG ATCATCACCT ACCGTACCGG CCAGCCCTAC ACGATTTGGG ACTGCTGGAA CGGCATCTAC AACTGCTCGC ATTTCATCCC CGCTGGTGCA CAGGGTCGGG ACGGTGGATA CGGAACGGCG CACGCTGCCG GCGTGTTCGA CTACATGTCC ATCAACCCAG TCTGGGCCAC TGCAGATGGA AGTGCTCCGC ACGACGATGG AACGAACCCA GCGTTCCCCG GAACTCCGGG TCGCGGCGGT TCCGTCGAAT TGCCTCTGGC GCCTTGCCAG GGCGCGGTCG GCTGCCAGAT GTACACCGGA CCGCGCGACA ACTACATTGG ACCGGGTAAC CACCAGTTCA ACATGGTTGT CGGTAAGCAG TTCAAGTTGA CGGAACGTTT CAGCCTCCAG TTCCGCGGTG AGATGTACAA CGTGTTCAAC AATCACAACC TGTACATCCT GACCGGGAAT AACGACGTGA GCACGGGTCT TCCGAACGTG CAGGCGTCGA AGGGCGGCTA CGGCAACTCG ACAGACGAGC GCCGTAACGT TCAGTTCGGT CTCAAGCTGA TCTTCTAA
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Protein sequence | MRTTVIRVLA VLALLFVFTS LVFGQAETGQ VTGTVTDPSG AIVAGAKVTI TDVNTGAQRT GTTNSSGSYT FTNLKPSTYD VVVEGSGFAK FTRRVDVTVG SKNEVSAQMS VTGGGTTVEV TAEGGAAQVN TESQTLSTVV TSKQVTELPT LTRNPYDLVA TSGNVNDDPS ARGAGLSING QRSASTDILL DGGENVDLFT ATVGQSVPLD SVQEFRVITS DFSAEYGRAS GGVVNVATKS GTNAFHGTAY EFNRVSALAA NTYINDSTRY DAFNGVPIDG LDPTCVVGQP CDAGKKGGFT RNQFGYSIGG PVVKNKLFFF SSTEWTRVRS SATQNAAVID PSLIGSGYLA PNVVDFLNSA SLRSSATTVG HVTCDQTITP TKPLGQCPTA IPGSQDLYQL VSFTLPNDSG GGAPQNTYST VNRVDWNISD KTTLYGRYAL YSEADAAGTN SWSPYDGFDT GTNVFNNNLN INLTHVFTPN FVSQSKIIYN RLNNQQPLGA APIAPTLYSQ ANTVPRINGA ELLYPGYLPF SPGNAIPFGG PQNLYQLYQD FSWTKGKHQF RFGGDYIQTR DNRVFGAYET AVSILSNGNA DRAINNLFSA ASGGGDGTLD LFEVGVNPQG AYPCPRYLTP KPAYCQYTTP VGPPSFSRNN GYNDGAWYVQ DSWKIHPRVT LNLGLRWEYY GVQHNSDPNL ESNFYEGPGS SLPAQIYSGQ VMIGKDSPSN GLWDKDTNNY APRIGFAWDV FGDGKTSIRG GYGISYERNF GNVTYNVIQN PPNYAVVTAG GIPLTTGNYD SINGGLPDGT LIGLSQPSLR LVSPHIKTAY SEFWSLSLER EVLKNSILAF EYSGSHGVHL YDIGNVNKAG FGNYYDPADM QAYATGVLGL ADASDMPCYP LCKLNQQYGN ANNRGDQGFS HYNSLNTRFT SNNLFNLGLQ LNFNWTWSHA IDNLSNTFSE GSNSFQLGYT DYFHPNLDTG SAEFNATHRL AISGVWDMPF GKKSSNGFVR AALGGWSVSP IITYRTGQPY TIWDCWNGIY NCSHFIPAGA QGRDGGYGTA HAAGVFDYMS INPVWATADG SAPHDDGTNP AFPGTPGRGG SVELPLAPCQ GAVGCQMYTG PRDNYIGPGN HQFNMVVGKQ FKLTERFSLQ FRGEMYNVFN NHNLYILTGN NDVSTGLPNV QASKGGYGNS TDERRNVQFG LKLIF
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