| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3495 |
|---|
| Symbol | |
|---|
| ID | 4072753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4122496 |
|---|
| End bp | 4123605 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637985517 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_592570 |
|---|
| Protein GI | 94970522 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.437184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGA ATAAAGGAAG TTTCCGTTCG GCACTCATTC TGGGCGGAGC TGGCTTTATC
GGCTCCAATC TGGCAAGTTG GCTCCTCCAA AATACCTCGG CTAAAGTACA CATTTTCGAC
AACTTATCGC GTTTCGGCGT GCGCAACAAT TTGGATTGGC TGCAGGGAAT GGCGGCCACT
TCTGGGCGGC TGCAGATCAC CGTTGGGGAC GTTCGCGACG CCGCCCACGT GGAGCGAGTG
GTTCGGCACG CGACGGAGAT CTACCACTTC GCGGCGCAGG TTGCAGTAAC CACATCAATC
TCCGATCCGA GGCACGATTT CGAGGTAAAT CTCGGGGGGA CGGTCAACGT ACTCGAAGCC
GCGCGGAAAA GCGACAATCA GCCCTTCATC TTCTTTACTT CGACCAACAA GGTATACGGC
GATTTCGGTG CGGAAGACCT TTATTTAGAC GGCAAGCGGT ATCGCAGCAA AAACGCAGCC
GGAACTTCAG AAACGCAGCC GCTGGATTTC CACTCGCCCT ATGGATGCTC GAAGGGGGCG
GCCGACCAAT ACGTTCGTGA CTATGCCCGG ATTTATGGAC TGAACACGGT AGTGTTCCGG
ATGTCGTGTA TCGCGGGCCA GCAGCAGTTC GGCAATGAAG ACCAGGGATG GGTGGCACAT
TTTCTGTACT CTGCTCTGCG CGGCGCGCCG ATCACGATCT ACGGCAATGG CAAACAAGTC
CGCGATGTGC TCTGCGTGGA TGACCTGGTA CGCGCAATCG ATCTGGCGCG GCAGTTGCCG
GCCTCATCCG AGGGGCGGAT TTACAACATC GGTGGCGGCG CGGAGAATGC GCTCTCGCTT
CTCGAATTAA TGGACCTTGT AAAGAGCGTG ACGGGGCACG GCTGCGATGT GACCTACGAT
GCCGCTCGGC CCGGTGACCA GCTTTACTAC GTCACCGACT TCGCGAAGTT CAAGCGGGAT
TCAGGGTGGC AACCGGAGAT CAGCCCCGAA GGCACGCTCA AAAAGATCTA CGACTTCTAC
AAGAAGAACC GCGATCTGTT CGCGCTGACT GCTGCAAGAC CTTCGATCTT GCCTGCGGCT
TCCGCTTCGG AGCTGGCGCA ACCGGCATGA
|
|---|
| Protein sequence | MTMNKGSFRS ALILGGAGFI GSNLASWLLQ NTSAKVHIFD NLSRFGVRNN LDWLQGMAAT
SGRLQITVGD VRDAAHVERV VRHATEIYHF AAQVAVTTSI SDPRHDFEVN LGGTVNVLEA
ARKSDNQPFI FFTSTNKVYG DFGAEDLYLD GKRYRSKNAA GTSETQPLDF HSPYGCSKGA
ADQYVRDYAR IYGLNTVVFR MSCIAGQQQF GNEDQGWVAH FLYSALRGAP ITIYGNGKQV
RDVLCVDDLV RAIDLARQLP ASSEGRIYNI GGGAENALSL LELMDLVKSV TGHGCDVTYD
AARPGDQLYY VTDFAKFKRD SGWQPEISPE GTLKKIYDFY KKNRDLFALT AARPSILPAA
SASELAQPA
|
|---|
| |