Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3471 |
Symbol | |
ID | 4069047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4094536 |
End bp | 4097217 |
Gene Length | 2682 bp |
Protein Length | 893 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637985493 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_592546 |
Protein GI | 94970498 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.440617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.051369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGGA TCGAGCGCAT CTTCCGCCGT CGGCGTCTTA GCGACGAATT GGCCGAAGAG CTGCGGCTGC ACATTGAAGA GAAGACCGAG CAGCTCATGC GCCTGGACGG CCTCTCTCGA AGCGAGGCGC GTGAGGCTGC GCTGCGCGCG TTCGGCAATC CGGTGCTGGT GGAGACACAG AGCACCGAGG TCTGGCAGTG GCCGCGGCTT GAATCGCTGC TGGCTGACCT GAGACTCGCT CTGCGGCGCT TGCGCAGGTC GCCGGGTTTT GCGACGACCG TGCTGCTGAC GCTGGCGGTC GGCATCGGCG CAAATACTGC CGTCTTCAGC GTGATCAACC GGGTGCTGTT GCAACCGCTG CCGTATCCGG AGGCCGATCA GCTTGTCTCG CTGCGGCTGA ACGCCCCGGG GGCAGCCGGT CTCGCCGACT TCCAGAACGG CCTCCCCCTC TCCTCCTCGA TGTACTTCAC CTTCAGCGAG AGCAACCGCA CCTTTCAGTC GCTGGGGACG TGGACCTCCG CCAGGGCCAA CGTGAGCGGG GTGGCGCAGG CGGAGCAAGT GAATGTCGTG CTCGTGACCG ACGGAGTTCT CGAAGCACTC GGGGTGCCTC CCCTGGCGGG CCGGGAACTG ACGGCGGCAG ACCAAGCGCC GAACGGCGCA AAGAATGTGG TGCTCAGCTA TGGGTACTGG CAGCGGCGCT TCGGTGGCGA TCGTTCCGTT ATCGGCCGCG CGATTGTTAT GGATTCGCAG GCGCGCACTA TTGTCGGGGT GATGCCGCGT GGATTCCGCA TCGTGGACCA TGACTTCGAC GTGCTGGCGC CCTCGGCGTT CGAGCGCAAC AAGCAATCGT TGGCCGGCTT TGGACTGCAG GGAATTGGGC GGCTCAAACC CGGAGTGACG ATCGCGCAGG CCAACGCAGA CATCGCGCGC CTGGTGCCGG TGTGGATGGA CTCATTTTCA AACGGCCCCG GATCGGACCC GCACTGGTAC GACGCGTGGA GGATCACGCC GGATTTTCAT TCCTTGAAAC AGGAAGTGGT TGGGAATGTG GGCAGCGTTC TTTGGGTGGT GATGGGCACG ATTGGAATCG TGCTGTTGAT TGCCTGCGTG AATGTGGCCA ATCTGCTGCT GGTTCGCGCC GAGGCGCGGC AGCTCGAACT CTCGATCCGC GCAGCCCTGG GCGCCGGACG GGGACGGATC GCGCGCGAGC TGCTTTTTGA AAGTTCGCTG CTCGGTCTGC TCGGCGGGAT CATGGGAATC GGCGTGGCTT TGGCAGGCTT GCGCTTGCTG GTTTCAATTG GCCCCGCGAA CCTGCCGCGA CTGACTGAGA TCACTCTCGA TGCACGCTCG CTTCTCTTTG CATTCGTTCT GTCACTCTTA TCGGGACTGT TCTTCGGATC GATTCCGGCG TGGAAATACA CACGGTATCG TGGCAATGTG AGTCTTGGCG CCACACGCAC GGTGAGCGCG AGCCGCGAGC GGCATAGGTC GCGCAACATT CTCATCGTCG CCCAGGTCGC GATGGCGGTT GTACTGCTGG TTTGCGCGAC GCTGATGATC CGCACCTTCC GTGAACTGTC GGCGGTTGAT CCGGGATTTA CGGATGCCCC TACGCTGCAA ACCCTGCGCA TCGCGATCCC CGAGTCGTCC ATCGCGGATC CGCAGATGGT CGCGCGCGTC GAGAACAACA TTGCGGACAA ACTCGCCTCG CTTCCCGGCG TGAGCGACGT GGGGTTTGCC CTGCTCGTCC CGATGGAAGA TGCCCAGCAT GGTTGGAACG CGATTCGCGC GGAAGGGAAA ACCTATGCAG GAGATCCGCC ACTCCGCTTC TATAACTACA TCTCTCCGGG ATACTTTCAG ACTATCGGCA CACATCTAGT TGCGGGCCGC GATATTACCT GGAAAGAAAT CTACGACGTT GCGCCACGCG CGATCGTTTC TGAGAATCTT GCCCGCGAAG AATGGGGCAG CGCTGCCAAT GCTATTGGAA AACGCTTTCG GGAAGCGCCA TCGGAGCCGT GGAGTGAGGT GATTGGCGTT GCGGAGAACG TGCACTACAA CGGCGTGAAT GAAAGAGCAC CGGCGATCGT GTACTGGCCG GCGATTATCC GCAATCCCTG GCTCGGAACC TTTACGCCAC GCTCGGTCGC GTTCGTGATC CGTAGCAAGC GCGCAGGAAC GGAAGCGCTC GTCAACGAGA TCCAGCAGTC GGTCCGGAGC GTCAACGCTG ACCTGCCTGT GGCCGCGCCT CGCACCATGC AGGAGATCTA CTCGAAGTCG CTGGCGCGCA CTTCCTTCAC CCTCGCGATG TTGGGAGTTG CCGCCGCAAT GGCGCTGGCA CTCGGCATCA TCGGCATCTA TGGGGTGATT TCCTATTCGG TATCGCAACG CACGCGGGAG ATCGGCATCC GCATGGCGCT CGGCGCCCAG AAATTGGAGC TGCGATGGAT GCTGGTGCGG AGCGCTTTAG TCCTCACGGG GATAGGCATC GTGATCGGAC TAGGGGCGGC GGCTGGCGTC GCGCGGCTGC TGACGACCCT GCTGTACGGC GTCAGCCCGC TGGATCCCTT TAGTTTCGCC GCGGTCCCAT TGATCCTCTT TGCGGCAGCG ACGCTGGCAA GCTTTCTGCC GGCTTCGCGG GTTGCCGTCA TCAATCCTGT GGATGCGCTA AAGGCGGAAT GA
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Protein sequence | MGWIERIFRR RRLSDELAEE LRLHIEEKTE QLMRLDGLSR SEAREAALRA FGNPVLVETQ STEVWQWPRL ESLLADLRLA LRRLRRSPGF ATTVLLTLAV GIGANTAVFS VINRVLLQPL PYPEADQLVS LRLNAPGAAG LADFQNGLPL SSSMYFTFSE SNRTFQSLGT WTSARANVSG VAQAEQVNVV LVTDGVLEAL GVPPLAGREL TAADQAPNGA KNVVLSYGYW QRRFGGDRSV IGRAIVMDSQ ARTIVGVMPR GFRIVDHDFD VLAPSAFERN KQSLAGFGLQ GIGRLKPGVT IAQANADIAR LVPVWMDSFS NGPGSDPHWY DAWRITPDFH SLKQEVVGNV GSVLWVVMGT IGIVLLIACV NVANLLLVRA EARQLELSIR AALGAGRGRI ARELLFESSL LGLLGGIMGI GVALAGLRLL VSIGPANLPR LTEITLDARS LLFAFVLSLL SGLFFGSIPA WKYTRYRGNV SLGATRTVSA SRERHRSRNI LIVAQVAMAV VLLVCATLMI RTFRELSAVD PGFTDAPTLQ TLRIAIPESS IADPQMVARV ENNIADKLAS LPGVSDVGFA LLVPMEDAQH GWNAIRAEGK TYAGDPPLRF YNYISPGYFQ TIGTHLVAGR DITWKEIYDV APRAIVSENL AREEWGSAAN AIGKRFREAP SEPWSEVIGV AENVHYNGVN ERAPAIVYWP AIIRNPWLGT FTPRSVAFVI RSKRAGTEAL VNEIQQSVRS VNADLPVAAP RTMQEIYSKS LARTSFTLAM LGVAAAMALA LGIIGIYGVI SYSVSQRTRE IGIRMALGAQ KLELRWMLVR SALVLTGIGI VIGLGAAAGV ARLLTTLLYG VSPLDPFSFA AVPLILFAAA TLASFLPASR VAVINPVDAL KAE
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